Pollicipes pollicipes (gooseneck barnacle): 119100416
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Entry
119100416 CDS
T08250
Name
(RefSeq) vacuolar protein sorting-associated protein 13-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppoi04131
]
119100416
Membrane trafficking [BR:
ppoi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
119100416
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_VAB
VPS13_C
VPS13_M
Motif
Other DBs
NCBI-GeneID:
119100416
NCBI-ProteinID:
XP_037079409
LinkDB
All DBs
Position
Unknown
AA seq
1801 aa
AA seq
DB search
MESDGAVECRVSLSDCVLQDTRPDKETCFPRLMEKVTRVGKPTAGMINVMFSQKANQDKT
LEVRVSSVSLILFLPYLMLLMEFFTKNMPEAPKKPPPSASKPAGGKPQRPTTLEPPRPAA
SAPASGRLTLQLTVERPDVALVEDLKDINTRAVVFDNEVRLKVQQTAEKTNIMGDISRVQ
LFTCVYSPEQREKTMNEIVSPFSVSVIGSITEGRGTRLQVEVTDVKLHVNAAAIHLLTSI
SSGLTGSSVRAEAPAAGPPSWGSLWDTHQLRTLDFWFMQTEVGEEMCEEVPVPALPAASG
GVRQEEELIFKARSLSVTVEQVVGARNVPLVLLDAAFEAQVKDWSSKLLAESSLTLELAY
YNSRLAAWEPIIECVERRESGMVSFSPWELHMKVEKNDDVLDVASPLSPASESGADSVNF
LPPVMSVTVSTKDPLEMTVTRTCLDVLTSLQESLGGALELTPPVADETDAHFLIRNRLEQ
QAVVATGSEYTVHGSDIEEVVLEQGAEVPLMARDLSSLQRPGTSTALDSNRTIHIKVPSL
GWSADVPVTRAESRFFRVARRRPDGAECGLVADIRAHFDSKIVTLRSCVQVENHQSVPVK
VYYMNSGGNELQCVGVAEPDGMLPLPLSAVYSSTAELFFGVDGYTVSLLPFVWRDLQKNP
DLTMTLKCDSKSGQPGQPFCMLCHGEMKPVLFETSRAKTLASRTYRVHLRPPAVLSNLLP
VALTYLRPGDLEPVTLEPGGSCQMPTAQTGDRVALQLLSYLDRRWSCSKQLEAEPDELTV
WTFLSADGDYQTDLSLGMHTRTVCGSQLMSLYAPFWMINRTGKMLTYKNCLDEVHSVNET
SNLIYHPETFLEPVLFSFKPSSFFSKKKAAVRVEDSEWSDKFSLDTVGSGGTVTCATHNW
DYGISVQIQLSQSGLTRQVYLLPSVVLANSAPFAIQVHEPAPEEDWITVPANTSQPFWPR
DRAKELRCRVADTSEETTYFSYKSTNTCLLHLSNTYGGISMSVQVSEASTIITLDDYVDG
MAAVRLINNTDNEEVAYHQKRFEPHSVLKPGEVRLYTWQRPASERQLSWSCGKVKERLDT
LVKDGIGQFEGKDGNLLYWVSFLDGMQRTLMFTTDVVVATQAHNAVELERIDQEITVSIE
GVGLSLVNNVSQTDVMYMGITSSGVVWETQKALHKRYRAMTSLQCSILERAHQNFMNQVQ
VGGNPQPRVVLDNKMEVDFSIMQMLQPNRRFLRRTFQSGLWLQLRTSTHQRQLHAKLNRL
QVDNQLLDSVFPVVLAPVPPPKSVAADNEPKPFVEMSMVERLAEHTFIKQFKYCKMLVQE
FHVKLDQGFINALVDALSVDKLNRNTKELVESDLEVATEELSKKVAIRSLQEQRNFYDNL
HFSPLKIHVSFSMTGGASSSSGGSPPITSGFINLLLQSVGVTLTEIQDVVFKLAYFEREH
QFLSQSELTSEVVAHYTGQAVKQLYVLVLGLDVIGNPFGLVVGLTDGVSDLFYEPIQGAI
QGPGEFAEGLALGVTSLFSHAVGGTAGAVSRITGTLGKGIAALTLDEDYQQRRREALNRR
PTDFTSGIAQSGRGLFMGVVDGVTGVVKKPLEGAQEEGALGFVKGMGKGMVGLFTRPTSG
VVDFASGSFDAVKRWRKQTDLKLIKKLNRTMDQDEVTRLRPPRHFQADRIIRPYVRHEAE
GAKMLLELEKGRYATTDAYVAHAICRADRRVVFLLTDFRVFLLNRNEIFGNWQVDWTYMW
KELSGPPKLTAKGLELRVPAAKKGFSLFGGSEGAKTVPITDKTSAEWMKNKMTETMQQYN
V
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggacggcgccgtcgagtgtcgcgtctcgctcagcgattgcgtgctgcaggac
actaggcccgacaaggagacatgtttcccgcgcctcatggagaaggtgacgcgcgtcggc
aagcccacagccggcatgatcaacgtcatgttcagtcagaaggccaaccaggacaaaact
ctcgaggtcagggtatcgagcgtgtcgctgatcctgttcctgccgtacctgatgttgctg
atggagttcttcaccaagaacatgccggaggcgcccaagaaaccgccgccttcggcgtcc
aagccggccggcgggaagccgcagcggcccaccacgctggagccgccgcggccggcagcc
agcgcgccggccagcggccggctgactctccagctgacggtcgagcggcccgacgtcgcg
ctcgtcgaggacctcaaggacatcaacacgcgcgccgtggtgttcgacaacgaggttcgt
ctgaaggtgcagcagacggccgagaagaccaacatcatgggtgacatcagccgggtccag
ctgttcacctgcgtctacagcccggagcagcgcgagaagaccatgaacgagatcgtcagc
ccgttctcggtgtcggtgattggcagcatcactgagggccgcggcacacggctgcaggtg
gaggtcaccgatgtcaagctgcatgtcaacgcagcggccatccacctgctgacgtccatc
agctcgggcctgacgggctccagcgtgcgcgccgaggcgccggcggccggcccgcccagc
tggggcagcctctgggacacacaccagctgcgcaccctcgacttctggttcatgcagacg
gaggttggggaggagatgtgcgaggaggttccggtgccggcgctgcccgctgccagcggc
ggcgtccgtcaggaggaggagctcatcttcaaggcgcgctcgctcagcgtcaccgtcgag
caggtggtcggcgcccggaacgtgccgctcgtgctgctggacgcggcgttcgaggcccag
gtcaaggactggagctccaagctgctggccgagtcgtcgctgacgctggagctggcgtat
tacaacagccggctggccgcgtgggagccgatcatcgagtgcgtggaacgccgcgagtcg
ggcatggtctccttctcgccctgggagctgcacatgaaggtggagaaaaacgacgacgtg
ctggacgtggcgtcgccgctgtccccagcttcggagagcggggccgactccgtcaacttc
ctgccgcccgtcatgagtgtgactgtcagcactaaggacccgctggagatgacggtgacc
aggacgtgcctggacgtgctgacgtcgctgcaggagtcgctgggcggcgcgctggagctg
acgccgcccgtcgccgacgagacggatgcccacttcctgatccgcaaccggctggagcag
caggccgtggtggccaccggctccgagtacacggttcacggctccgacatcgaggaggtg
gtgctggagcagggcgctgaagtaccgctgatggcgcgtgacctgtcctcgctgcagcgg
ccgggcacgtcgacagcgctggactcgaacagaaccatccacatcaaggtgccgtccctg
ggctggagcgccgacgttcccgtgacgcgggctgagagccgcttcttccgggtggcgcgg
cggcggccggacggcgccgagtgcggcctggtcgccgacatacgcgcccactttgactcc
aagatcgtgacgctgcgcagctgtgtacaggtggagaaccaccagagcgtgcccgtcaag
gtgtactacatgaacagcggcggcaacgagctgcagtgtgtgggcgtggccgagccggac
ggcatgctgccgctgccgctctcggccgtctacagcagcacagccgagctcttcttcggc
gtggacgggtacacggtgtccctgctgccgtttgtctggcgtgacctgcagaagaacccc
gacctgacgatgacgctcaagtgcgacagcaagagcggccagcccggccagcccttctgc
atgctgtgtcacggcgagatgaagccggtgctgttcgagacgtcgcgcgccaagacgctg
gccagccggacgtaccgggtgcacctgcggccgccggccgtgctcagcaacctgctgccg
gtggcgctgacctacctgcggcccggtgacctggagccggtcacgctggagccgggcggc
tcgtgtcagatgccgacggcgcagaccggcgaccgggtcgcgctccagctgctcagctac
ctggaccggcgctggtcgtgcagcaagcagctggaggccgagccggacgagctgacggtg
tggacgttcctgtcggccgacggagactaccagaccgacctcagcctgggcatgcacacg
cgcaccgtgtgcggctcgcagctgatgtcgctctacgcccccttctggatgatcaaccgc
accggcaagatgctcacctacaagaattgtctcgatgaggtacactctgtcaacgaaaca
tccaacctgatctaccacccggagaccttcctggagccggtgctgttctccttcaagccg
agctcgttcttctccaagaagaaggcggcggtgcgcgtggaggactccgagtggtcggac
aagttctccctggacacggttggcagcggcggcaccgtcacctgcgccacccacaactgg
gactacgggatcagcgtccagatccagctgagccagtcgggcctgacgcgccaggtgtac
ctgctgccgagcgtggtgctggccaacagcgcgccgttcgccatccaggtgcacgagccg
gcgcccgaggaggattggatcaccgtgcccgccaacacgtcgcagccgttctggccgcgc
gacagggcgaaggagctgcgctgccgcgtggccgacaccagcgaggagaccacgtacttc
tcctacaagagcaccaacacttgcctgctccacctgagcaacacttacggtggcatcagc
atgagcgtgcaggtgtccgaggcctccaccatcatcactctggacgactacgtcgacggc
atggccgccgtccgcctcatcaacaacaccgacaacgaggaggtcgcctaccaccagaaa
cgcttcgagccgcacagcgtgctgaagccaggagaggtgcggctgtacacgtggcagcgg
ccggccagcgagcggcagctctcctggagctgcggcaaggtcaaggagcggctcgacacg
ctggtcaaggatggcatcggccagtttgagggcaaggacggcaacctgctgtactgggtc
agcttcctggacggcatgcagcgcacgctgatgttcacgacggacgtggtcgtcgccacg
caggcgcacaacgccgtggagctggagaggatcgatcaggagatcaccgtcagcatcgag
ggcgtggggctctcgctggtcaacaacgtctcgcagacggacgtcatgtacatgggcatc
accagctccggtgtggtgtgggagacgcagaaggcgttgcacaaacgctaccgagccatg
acgagtctgcagtgctcgatcctggaacgggcgcaccagaacttcatgaaccaggtgcag
gtgggcggcaaccctcagccgcgcgtcgtgctcgacaacaagatggaggtggacttcagc
atcatgcagatgctgcaaccgaaccgacgcttcctgcggaggacgttccagagcggcttg
tggctgcagctgcgcaccagcacccaccagcgccagctgcacgccaagctgaaccggctg
caggtggacaaccagctgctcgactcggtcttccctgtagtgctggcgcccgtgccgccg
cccaagtccgtggcggccgacaatgagcccaagccgttcgtggagatgtcgatggtggag
cggctggccgaacacaccttcatcaagcagttcaagtactgcaagatgctggtgcaggag
ttccacgtcaagttggaccaaggcttcatcaacgcactggtggacgcgctcagcgtggac
aagctgaacaggaacacgaaagagctggtggagagtgatctggaggtggcaacggaggag
ttgtcgaagaaggtggccatccgaagcttgcaggagcagaggaacttctacgacaatctc
cacttctcaccgctgaagatccacgtgagcttctcgatgacgggcggcgccagctccagc
tcgggcggcagtccccccatcacgtccggcttcatcaacctgctgctgcagagtgtgggc
gtcacgctcaccgagatccaggacgtcgtgttcaagctggcgtacttcgagcgcgagcac
cagttcctgtcgcagtcggagctcacctccgaggtggtggcccactacacgggccaggcg
gtgaagcagctgtacgtgctggtgctcggcctggacgtgatcggcaacccgttcggcctg
gtggtgggcctgaccgacggcgtgtcggacctcttctacgagccgatccagggcgctatc
cagggcccgggagagttcgccgagggcctggcgctgggcgtcaccagcctgttcagtcac
gcggtgggcggcacggccggcgccgtctcgcgcatcaccggcactctgggcaagggcatc
gcagcactgacgctggacgaggactaccagcagcggcgccgggaggccctgaaccggcgt
ccgaccgacttcaccagcggcatcgcccagagcggccgcggcctcttcatgggcgtggtg
gacggcgtgaccggcgtggtgaagaagccgctggagggcgcacaggaggagggcgcgctc
ggcttcgtcaaaggcatgggcaagggcatggtgggcctgtttacgcgacccacctccggc
gtggtggacttcgctagcggctcattcgacgctgtgaagcgctggcgaaagcagacggat
cttaagttgataaaaaagctgaacaggaccatggaccaggacgaggtgacccggctgcgg
ccgccgcgtcacttccaggcggaccgcatcatccggccctacgtccggcacgaggccgag
ggcgctaagatgctactggagctggagaagggccggtacgccaccacggacgcgtacgtg
gcgcacgccatctgccgggccgaccgcagggtcgtcttcctgctcactgacttcagggtg
ttcctgctgaaccgcaacgaaatctttggaaactggcaggtggactggacttacatgtgg
aaggagctgtcggggccgccgaagttgacggccaagggtctggagctgcgcgttcccgcc
gccaagaagggcttctcgctgttcggcggctcggagggcgccaagactgtgcccatcacc
gacaagaccagcgccgagtggatgaagaacaagatgacggagacgatgcagcagtacaac
gtctag
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integrated database retrieval system
