Pollicipes pollicipes (gooseneck barnacle): 119100430
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Entry
119100430 CDS
T08250
Name
(RefSeq) ATP-dependent RNA helicase DDX54-like
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppoi03009
]
119100430
Enzymes [BR:
ppoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119100430
Ribosome biogenesis [BR:
ppoi03009
]
Eukaryotic type
Pre-60S particles
Helicases
119100430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
119100430
NCBI-ProteinID:
XP_037079419
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
LVSDAEEVDTRRLVAEQNKKKRKSGGFQSMGFSNSVYKGIVKRGYKIPTPIQRKCIPVIL
EGKDVVAMARTGSGKTACFLLPMLEKLQVASAMSGARALVLSPTRELALQTLRFTKELGR
FSNLRAAAVLGGDSMEGQFSALHEKPDIIIATPGRFVHVCVEMELRLDAVEYVVFDEADR
LFEMGFAEQLREILARLPDARQTLLFSATLPGMLVEFARAGLTDPVLVRLDVETKLSEQL
SLAYLRCRDDERSLLLLHLLENVVPAGQQTVVFAATKHHVEYIRLLLERAGLSCTFLYSD
LDPAARKINTDKFRHKRVNVLVVTDVAARGIDIPHLDNVINYNFPAKPKLFVHRVGRVAR
AGRPGTAYSILIHNELPYLLDLYLFLGSKLTFTPSTNLDKEVNWHGYLGSIPQELVDVDS
ERIQLWHDTSNDLRAALKSSQNAFKQYLRSRPAASAASVRRMKEEAARPLGVHPVLRPAG
ATAGADERARLIDAVRGYKASRTIFEVGVTSHQNSAKVMKAKRNRDEHVIERAVAKRKAA
ELEDGDEQQEGERGMRVLSRCCPSLPAAAARDEQNYIPYQAKDHHTEAGYSVTSAFEREA
STALLDLAMDDDTRHRRQANAKHWDPKKKKYVGNSNDGKNKKIRTESGVWIPATFQKAGK
YDEWKKKTQLDAQDSDSDEGHQRKGGRGLKVIRHRKNQSRPALGGGPAHAKRPEMRSSDQ
ILKQRDLTERRRNRSTVGVGKGRGGKSRGGKTGGGKAGGAAGRGGGQMDDIHASRVEVVQ
T
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
cttgtctcggacgccgaggaggtggacacgcgccgcctggtggccgagcagaacaagaag
aagaggaagtctggcggctttcagtccatgggcttcagcaattctgtatacaagggcatt
gtcaagcggggctacaagatcccaacacctattcagaggaagtgtattcctgtgatcctg
gagggcaaggacgtggtggccatggctcgcacgggcagcggcaagacggcctgtttcctg
ctgccgatgctggagaagctgcaggtggcgtcagccatgtctggcgcgcgggctctggtc
ctctcccccaccagggagctggcgctgcagacgctgcgcttcaccaaggagctgggccgc
ttctccaacctgcgggcggccgccgtgctgggaggcgactcgatggagggtcagttctcg
gcgctgcacgagaagcccgacatcatcatcgccacgccgggcaggttcgtgcacgtgtgt
gtggagatggagctgcggctggatgcggtcgagtacgtggtgttcgatgaggcggaccgg
ctgttcgagatgggcttcgccgagcagctgcgcgagatcctggctcggctgcctgatgcc
cgacagactctgctcttctcggccacgctgcccggcatgttggtggagtttgctcgcgcc
ggcctcaccgaccctgtcctggtcagattggacgtggagacgaagctctccgagcagctg
agcctggcgtacctgcgctgtcgcgacgacgagcgcagcctgctgctgctgcacctgctg
gagaacgtggtgcccgccggccagcagacggtggtgttcgccgccaccaagcaccacgtc
gagtacatccggctgctgctggagcgggccggcctcagctgcacgttcctgtactctgac
ctggacccggccgcgcgcaaaatcaacacggacaagttccgtcacaagagggtcaatgtg
ctggtggtgactgatgtagcggcgcgtggtatcgacatcccccacctggacaacgtcatc
aactacaactttccggccaaacccaagctgttcgtgcacagagtcggtcgtgttgcccgc
gctggtcggccagggacggcttactcgatcctcatccacaacgagctgccctatctgctc
gacctgtacctgttcttgggctccaaactgacgttcacacccagcaccaacctagacaag
gaggtcaactggcacggctacctgggctccataccgcaggagctagtggacgtggactcg
gagcggattcagctgtggcatgacacctccaacgacctgcgggcggcgctgaagagcagc
cagaacgcgttcaagcagtacctgcgctcgcggccggcggcgagcgcggccagcgtgcgc
cgcatgaaggaggaggcggcccggccgctgggcgtgcatccggtgctgcggccggccggc
gccacggccggcgccgacgagcgcgcccggctcatagacgccgtgcgcggctacaaggcg
tcccggaccatattcgaagtgggcgttacttctcaccaaaacagcgccaaggtgatgaag
gccaagcggaacagggatgagcacgtcattgaacgtgccgtcgccaagcgcaaggcggct
gagctcgaggacggcgacgagcagcaggagggtgagcgtggcatgcgtgtgctgagccgc
tgctgcccttcattgccagcggcggcggcgcgcgacgagcagaactacatcccgtaccag
gccaaggatcaccacaccgaggccgggtactcggtgacgagcgcgtttgagcgcgaggcg
agcactgcccttctggacctcgccatggatgacgacacgcgccaccgccgccaggctaat
gccaaacactgggatcccaagaagaagaaatatgtcggcaattcaaatgacggcaagaac
aagaagatccggaccgagtcgggcgtctggatcccggccacgttccagaaggccggcaag
tacgacgagtggaagaagaagacgcagctggacgcgcaggactccgactccgacgagggt
caccagcggaagggcggtcgcggcctcaaagtgatccggcaccgtaagaaccagtcgcga
ccggcgctgggcggcgggccggcacacgccaagcggcccgagatgcgctcctccgaccag
atcctcaagcagcgcgatcttacggagagaaggcgaaatagaagtaccgtcggcgtcggc
aaggggcgcggaggcaagtcgcgtggcggcaagaccggcggaggcaaggccggcggtgcc
gcgggcagagggggcggacagatggacgatattcacgcaagccgagtcgaggtcgtccag
acctga
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