Pollicipes pollicipes (gooseneck barnacle): 119100467
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Entry
119100467 CDS
T08250
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119100467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppoi03041
]
119100467
Spliceosome [BR:
ppoi03041
]
Complex C
Other components
Step II factors
119100467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
EIF3I
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_IFT122_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_Vps41
WD_LRWD1
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
119100467
NCBI-ProteinID:
XP_037079454
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MSSILALRGYGSDSNESGADEIEDEEALTAHLRPIQSTESSLGLKTSMQVCLAPTVAPKV
NDKSLAWTDRRHLDPTTKELAYNPRFDELFAPVLGPAHPAQTQQQRAERNTLAGYVEPAH
FSAFQFENQRRTFTSYGYAVDPSTEATTEEGAARMVGAATASTSADSAPTVFEKTSEKRP
LDKRKRLKNADASDTDGYLGPWGGFVDEQKVMKPTEEEQAELDIIVAKRQKRGKQTDDKP
MEERTILHIKDAYDYQGRSYLHAPQDVGVNLRSEDPPDKCFIPKKLLHTWQGHSKGVHAT
RFFPKSGHLILSCGMDCKIKLWEVYNQRRMLRTYLGHRQAVRDVCFSNDGTQFLSAGYDR
YIKLWDTERGECVSRFTNKKVPYCVKFHPDEDKQHLFVAGLSDKKILCWDTRSGEITQEY
DRHLGAVNTITFIDENRRFVSTSDDKSLRIWEWDIPVDMKYIADPSMHSMPAVALSPNGK
WLACQSMDNKICIFSAINRYKLHRKKSFTGHMVAGYACGLDFSPEMSYLVSGDADGKCYV
WDWKTTKLYSKWKAHDGVCIQAMWHPHETSKVVTAGWDGEIKLWD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctattttagctctacgtggatatgggtcggatagcaatgaatctggtgcagat
gaaattgaggacgaagaagctttgacagcccatttgagaccgattcagtctacggagagt
tcgcttggattgaaaacatcgatgcaagtgtgcttggcgccgacagtcgcgcccaaggtg
aatgacaagtcactggcctggactgaccggcgccacctggacccgaccaccaaggagctt
gcatacaacccgcgctttgacgagctgttcgcgcccgtgctgggccccgcccacccggcg
cagacgcagcagcagcgcgccgagcgcaacactctggccggctatgtcgagccggcccac
ttcagcgccttccagttcgagaaccagcgtcgcaccttcaccagctatggttacgcggtg
gacccgagtacggaggcgacgacggaggagggcgccgcgcgcatggtgggcgccgccacc
gcctccaccagcgccgacagcgcgccgaccgtgttcgaaaagacgtcggagaagagacca
ctcgacaagcggaagcggctgaagaacgcggacgccagcgacacggacggctacctcggc
ccctggggcggcttcgtcgacgagcagaaagtgatgaagccaactgaggaggagcaggcc
gagctggacatcatcgtggccaagcgacagaagcgcggaaagcagacggacgacaagccc
atggaggagcgcaccatcctccacatcaaggacgcgtacgactaccagggccgctcgtac
ctgcacgcgccgcaggacgtgggcgtcaacctgcgctccgaggacccgcccgacaagtgt
ttcatccccaagaagctgctgcacacgtggcagggccacagcaagggcgtgcacgccacg
cgcttcttccccaagtcgggccacctcatcctctcctgtggcatggactgcaagatcaag
ctgtgggaggtgtacaaccagcggcggatgctgcgcacctacctgggccaccggcaggcc
gtcagggacgtctgcttcagcaacgacggcacccagttcctgtcggccgggtacgaccgc
tacatcaagctgtgggacacggagcggggcgagtgcgtgtcccgcttcaccaacaagaag
gtgccctactgcgtgaagttccatccggacgaggacaagcagcatctgtttgtggccggt
ctctccgacaagaagattctttgctgggacacgcgttctggcgagataacgcaggagtac
gaccgccacttgggcgccgtcaacaccatcaccttcatcgacgagaaccggcgcttcgtc
tccacctcggacgacaagagcctccgcatctgggagtgggacatcccggtggacatgaag
tacatcgccgacccgtcgatgcacagcatgccggccgtggcgctctcgcccaacggcaag
tggctggcctgccagtccatggacaacaagatctgcatcttctcggccatcaaccgctac
aagctgcaccgcaagaagtcgttcacaggtcacatggtggccggatatgcgtgcggtctc
gacttctcgccagagatgagctatctggtgtcgggcgacgccgacggcaagtgctatgtc
tgggattggaagacgacgaagctgtacagcaagtggaaggcgcacgacggcgtctgcatc
caggccatgtggcacccgcacgagacgagcaaggtggtgacggccggctgggacggcgag
atcaagctctgggactga
DBGET
integrated database retrieval system
