Pollicipes pollicipes (gooseneck barnacle): 119100764
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Entry
119100764 CDS
T08250
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03030
DNA replication
ppoi03410
Base excision repair
ppoi03420
Nucleotide excision repair
ppoi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119100764
03410 Base excision repair
119100764
03420 Nucleotide excision repair
119100764
03430 Mismatch repair
119100764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppoi03032
]
119100764
03400 DNA repair and recombination proteins [BR:
ppoi03400
]
119100764
DNA replication proteins [BR:
ppoi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119100764
DNA repair and recombination proteins [BR:
ppoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119100764
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
Rad17
AAA_30
PTCB-BRCT
AAA_22
RuvB_N
nSTAND3
AAA_33
AAA_14
AAA_17
AAA_16
AAA_5
Zeta_toxin
AAA_18
RNA_helicase
NTPase_1
AAA_assoc_2
AAA_6
AAA_19
AAA_7
Motif
Other DBs
NCBI-GeneID:
119100764
NCBI-ProteinID:
XP_037079789
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MSQDIRKFFGGGNGKKQTDIRAMFGKKTASGQASRKPAVAATVISDLDSDDDAPAKKRRR
PARIVDSDDEEEGKKKLASKGKDRGNEAKKRTNGAKPESVTADSFFGSAKPSRTQTYSKL
SKKPLPEAHDDPSMAATLAQLDEEPTASRTTLASRLSKLRRPDGGGSRLSESDDEDGPTR
IREPAAGRDAPVEANAASKKEAASDKKTRPKKTAATEGSTAPAEVTPSKKTTAPEGSTPP
AEATPSKKVTPSKRKAAASEAATPPAKRPKPSAAPPATTPDEQRQKKAENYRRFLERRQA
GPKNPGAREVPEGSPGCLSGLTLVLTGLLDSLGREEAADLCKRLGARVTGSVSRNTSYLV
VGDDPGQSKTEKAAKIGTKVLDEEGLFDLIKSRSTAAGPPPTAEPKLELEPELMPKPKPE
PRAGGAKREASEEVPPRQTVKREPAATGTQAGGAPAAGGETQMWVDKYRPTATKAIVGQQ
GDKSAMNKLKQWLQRWHRFHTGPNKVKVKTYNQGYNDDGSNYKAALLSGPPGVGKTTTAH
LVCKELGFEVVELNASDSRSKKLLDKFTDCLQMSSLGAMFQADGGGQVTERHVLLMDEVD
GMAGNEDRGGVAAVIQLIRQARVPVICMCNDRHHPKIRSLAQYCFDLRINKPRLEQIRGA
MMSICFKEKLKMTRESLDALIMGTNQDIRQVLHLLSVAAAQQAAGPAAARATKDTRRGAF
DVVQSVFSATERQSMTIDDKIRLFFHDYSLGPLFVQENYLRASARSARGDVARQLELTSR
AADAICDGDLVDSCVRSGQSWSLLPTFAVFNTLIPGELLSGHLNGRIEFPQWLGKNSSRN
KTLRQVEDVQAHMRLRISGSRQDVLMDYCGPLRDRITAPLLGGAQDGVPEAAQAMFSYDL
MREDLDDLIELSLWSGRRDPMARLDTKTKAAFTRAVRSGHHSYPYASAQEATKRRRADPD
PLLGGDEEEEREDEQEDEDVAKDKMVKVKTSKAASKSEPSTSKGKGKGKGKSRK
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaggacatccggaaattcttcgggggtggaaatggcaagaaacagacggacatc
cgagccatgttcggcaagaagacggcatcgggccaggcgtcgcggaagcccgccgtcgct
gcgaccgtgatctcggacttggattccgacgacgacgcccccgccaagaagcgcaggcga
cccgccagaatcgtggactcggatgacgaagaagagggcaaaaagaagctggcttccaaa
gggaaagaccgtggtaatgaggccaagaaaagaacgaatggagccaagccggaatccgta
acggccgacagcttttttggatcagcgaagccgtcaaggacgcagacatattcgaagctg
tccaaaaagccgctgccggaggcgcacgacgacccgagcatggcggcgacgctggcgcag
ctggatgaggagccgactgccagtcgaacgacgctggccagccggctgtcgaagctgcgc
cggccggacggcggcggcagccggctgtcagagagcgatgacgaggacgggccgacgcgc
atcagggagccggccgccggccgggatgcgccggtggaggcgaacgcggcgtccaaaaag
gaagccgcgtccgacaaaaagacgcgccccaaaaagaccgcggcaaccgaggggagcacg
gctcctgctgaggtcaccccgtcaaagaagaccacggcacccgaggggagcacacctccc
gccgaggccaccccgtcgaagaaagtcacgccgtccaagagaaaggccgcggcctctgag
gccgccacgccgccggccaagcggccgaagccttcagcggcgccgccggccacgacgccc
gatgaacagcggcagaagaaagcggagaactacaggaggttcctggagaggcgtcaagcc
ggcccgaaaaaccccggcgccagggaggtaccggagggctcccccggctgcctgtcgggc
ctgacgctggtgctgaccggcctgctggacagcctgggtcgcgaggaagcggccgacctc
tgtaagcgactgggcgcccgcgtcacgggcagcgtcagccgcaacacttcctacctagtg
gtcggtgacgacccgggccagagcaagacggagaaggcagcgaagatcggcaccaaagtt
ctggacgaggagggcctgttcgacctgatcaagtcccgctccaccgccgccgggccgccc
ccgaccgccgagccgaagctggagctagagccggagctgatgccgaagccgaagccggag
ccgcgcgccggcggcgccaagagagaagcttcggaggaggtgccgccgcgccagaccgtg
aagagggagccggcggcgacgggaacgcaggcgggcggcgcgccggccgccggcggcgag
acccagatgtgggtggacaagtaccggcccaccgccaccaaggctatcgtcggtcagcag
ggcgacaagtcggccatgaacaagctgaaacagtggctgcagcggtggcacaggtttcac
accggccccaacaaggtcaaggtcaagacctataaccagggctacaacgacgacgggtcc
aactacaaggcggcactcctgtcgggaccgccgggtgtcgggaagacgaccacggctcac
ctggtgtgcaaggagctgggcttcgaggtggtggagctgaacgcctccgactcgcgctcc
aagaagctgctggacaagttcaccgactgtctgcagatgagctcgctcggcgccatgttc
caggccgacggcggcggtcaggtgacggagcggcacgtgctgctgatggacgaggtggat
gggatggcgggcaacgaggaccgcggcggcgtggcggccgtcatccagctgatccgacag
gcgcgggtgccggtcatctgcatgtgcaatgaccgccaccatcccaagatccgctcgctc
gcccagtactgcttcgacctgcgcatcaacaagccccgtctggagcagatccgcggcgcc
atgatgtccatctgcttcaaggagaagctgaagatgacgcgcgagtcgctggacgcgctg
atcatgggcacgaaccaggacattcgccaggtgctgcacctgttgtcggtggcggccgcg
cagcaggcggccggtccggcggcggcgcgcgccaccaaggacacgcgccggggcgcgttt
gacgtggttcagagcgtgttcagcgccaccgagcggcagagcatgacgatcgacgacaag
attcggctgttcttccacgactacagtttgggcccgctgttcgtgcaggagaactacctg
cgcgcctcggcccgctcagcccgcggggacgtggcgcgacagctggagctgaccagccgg
gcggccgacgccatctgcgacggcgacctcgtcgacagctgcgtccgctccggacagagc
tggagcctgctgcccacattcgccgtgttcaacacgctgatcccgggcgagcttctgtcg
ggccacctgaacgggcgcatcgagttcccgcagtggctgggcaagaactcaagccggaac
aagacgctgcgtcaggtggaggatgtgcaggcgcacatgcggctcaggatctctggcagt
cggcaggacgtgctgatggactactgtggcccgctgcgggaccgcatcacggcaccgctg
ctgggcggtgcgcaggacggcgtgccggaggcggcgcaggccatgttcagctacgacctc
atgcgtgaggacctggatgacctaatcgagctgtcgctctggtcgggccgccgggacccc
atggcgcggctggacaccaagacaaaggcggctttcacgcgcgcggtacgcagtggacac
cacagctacccgtacgccagcgcgcaggaggcgacgaagcggcgccgcgccgaccccgat
cccctcctcggcggcgacgaggaggaagagcgcgaggacgagcaggaggacgaagacgtc
gccaaggacaagatggtcaaggtaaagacgtcgaaagccgctagcaagagtgagccatcc
acttccaagggcaaaggaaagggaaaaggcaagagcaggaagtga
DBGET
integrated database retrieval system
