Pollicipes pollicipes (gooseneck barnacle): 119101490
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Entry
119101490 CDS
T08250
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03013
Nucleocytoplasmic transport
ppoi03015
mRNA surveillance pathway
ppoi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119101490
09122 Translation
03013 Nucleocytoplasmic transport
119101490
03015 mRNA surveillance pathway
119101490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119101490
03041 Spliceosome [BR:
ppoi03041
]
119101490
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
119101490
Spliceosome [BR:
ppoi03041
]
Common components
Common spliceosomal components
Cap binding complex
119101490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
DUF2267
Motif
Other DBs
NCBI-GeneID:
119101490
NCBI-ProteinID:
XP_037080723
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MSKSVRRKYDDDFDDDSRSAKRRRLSTDAAEIEDRLESLIIRVGERSTASLESNLEGLSS
VLENDLVKAKNKIQRILVDCASKMPERSSVYSTLVGLLNAKNYNFGGEFAESLVRCLKDS
LKICEWDKARNCLRFLSDLVNCHVVSASSLLAVYDNFLDAAMETGVPQVRTDWLVYAVLT
CLPWVGRELFEKREADLDRLLATIRTYLDRRSKKHVPALRVWSSDDPHPQEEQLDCLWAQ
ISKLRADSWQEKHILRPYLAFDSILSEALQHKLPDIQAPLHHATNVYPQPKVVFRMFDYT
DCPESGPILPGAHSIERYLIEEHIHHILEVHHNDRKECSAQLLNFPHKTKIPLDYMIVEV
VFAELFQMPSPRFLEINYGCILIELCKLQPSTIPQVLAQATEILFERIDTMNVSAFQRFV
TWFSYHLSNFHFRWSWADWADCLTLDPEHPKPKFVRETFEKSLRLSYHQRVQEMAGQEFA
ALVPLEPKPRFRYGEEGAASLAGTMVAHQLITAIKERCTPEEAIRLLKEMPNPLKAGDDD
AEPTHNPLKIEVFTETLIYVGSKSFSHAFAAIAKFRYVFKVLAETEEAQICVLRSLYEVW
KNHPQMMCVLVDKMLKTQIVECSAVANWIFSREMNAVFLKSYVWEILNLTIRKMSQHVHK
LTVEAAEARARLHRDSEDSDSDEERRDRPSDEQVERMEERLEQAQSDQKTLFLIIFQRFI
MILSEHLVRSDTDGRDFRTHWWKWTFGRLQQIFMQHNEQVHKYSQTLETLLFTQDLDPHV
LDAFHQFLALRA
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatctgtcaggaggaagtatgatgatgactttgatgacgactctagatcagcg
aagcgtcgccgcctgtcgacggacgccgccgagatcgaggaccggcttgagtccctgatc
atccgcgtcggagaaaggagtactgcgtctttggaatccaacctggagggtctgtcatcg
gtcctggaaaatgatctcgtcaaggccaaaaacaagatccaaagaatcttggtggactgc
gcgtccaagatgccggaacggtcgtccgtttactcgacgctggttggcctgctcaacgcc
aagaactataatttcggcggtgagttcgccgagtcgctggtgcgctgcctgaaggacagc
ctgaagatctgcgagtgggacaaggcgcgcaactgtctgcgcttcctctccgacctggtc
aactgccacgtggtgtcggcctcctcgctgctggccgtctacgacaacttcctggatgct
gccatggagacgggcgtgccccaggtgcgcaccgactggctggtgtacgccgtgctcaca
tgcctgccctgggtcggccgcgagctgttcgagaagcgcgaggccgacctggaccggctg
ctggccaccatccgcacctacctggaccggcgcagcaagaagcacgtgccggcgctgcgc
gtctggtccagcgacgacccgcacccacaggaggagcaactggactgtctgtgggcgcaa
atcagcaagctgcgtgccgacagctggcaggagaagcacatcctgcggccgtacctggcc
ttcgactcgatcctgtcggaggcgctgcagcacaagctgcccgacattcaggcgccgctg
caccacgccaccaacgtctacccccagcccaaggtcgtcttcaggatgttcgactacaca
gactgtccggagagcggcccgattctgcccggcgcacacagcatcgagcgctacctcatc
gaagagcacatccaccacatcctggaggtgcaccacaacgaccgcaaggagtgctcggcg
cagctgctcaacttcccgcacaagaccaagataccgctcgactacatgatcgtggaggtg
gtgttcgccgagctgttccagatgccgtcgcccaggttcctcgagatcaactacggctgc
atcctgatcgagctgtgcaagctgcagccgagcaccatcccgcaggtgctggcccaagcc
accgagatcctgttcgagcgcatcgacaccatgaacgtatcggcgttccagaggttcgtc
acctggttcagctaccatctgagcaacttccacttccgctggtcgtgggccgactgggcc
gactgcctgacgctggacccggagcaccccaagcccaagttcgtgcgcgagacattcgag
aagtcgctccggctcagctatcaccagcgggtccaggagatggccggtcaggagttcgcg
gcgctggtgccgctggagcccaagccacgcttccggtacggcgaggagggcgccgcctcg
ctggccggcaccatggtggcgcaccagctgataacggccatcaaggagcgctgcactccc
gaggaggccatccgactgctgaaggagatgcccaacccgctaaaggccggagacgacgac
gccgagcccacgcacaacccgctcaagatcgaggtcttcaccgagacgctcatctacgtc
ggctccaagagcttctcgcacgcgttcgcggccatcgccaagttccgctacgtgtttaag
gtgctggccgagacggaggaggcgcagatctgcgtcctgcgcagcttgtacgaggtgtgg
aagaaccacccgcagatgatgtgcgtgctggtggacaagatgctgaagacgcagatcgtc
gagtgctcggcggtcgccaattggatcttctcgcgcgagatgaacgccgtgttcctcaag
tcctacgtctgggagatcctcaacctgaccatccgcaagatgagccagcacgtgcacaag
ctgacggtggaggcggccgaggcgcgggcgcgcctgcaccgggactcggaggacagcgac
agcgacgaggagcggcgcgaccggcccagcgacgagcaggtggagcgcatggaggagcgg
cttgagcaggcccagtccgaccagaagacgctcttcctcatcatcttccagcggttcatc
atgatcctgtcggagcacctggtgcgctctgacacagacggcagggacttccgcacccac
tggtggaagtggacctttggccgactccagcagatcttcatgcagcacaacgagcaggtg
cacaagtacagccagacgctggagacgcttctgttcacccaggacctggacccgcacgtg
ttggacgccttccaccagttcctggcgctgcgtgcctga
DBGET
integrated database retrieval system
