KEGG   Pollicipes pollicipes (gooseneck barnacle): 119101636
Entry
119101636         CDS       T08250                                 
Name
(RefSeq) LOW QUALITY PROTEIN: negative elongation factor B-like
  KO
K15180  negative elongation factor B
Organism
ppoi  Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ppoi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    119101636
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppoi03021]
    119101636
Transcription machinery [BR:ppoi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     119101636
SSDB
Motif
Pfam: COBRA1 RNA_pol_Rpb1_1
Other DBs
NCBI-GeneID: 119101636
NCBI-ProteinID: XP_037080934
LinkDB
Position
Unknown
AA seq 579 aa
MSGGGLEEIGIPGKEYLRKALTSCSDPLKAIGDFQAENGILLPSLRPMLPLLDLHGVKRF
EFHMSVMESLCDKLIQQINAIGRLEGRERDKKLRDLLHKSFPVIRFKTLRPVVMAILKHT
REVDHKFLKVLVRDKELYNDLDTEVKRQIWTDHQTLFGDEVSPLFIQYVQEKEAALLTHT
NLTNFFDLTPKVRRQGEIIQKIVHMIGHSVKLYDMVLQFLRTLFVKTRNVHYCTLRAELL
MALHDLEIQEIVDVDPCHKFTWCLDACIRERTVDNKRGRELQGFLDSIRKGNEQILSDLS
MILCDPFAVNFLATSALKILAQLINNESLPREHTVLLLLLXMLELGLHAWDMIDRQEFRE
PRLDPQVVTKFVPSLVSLIVDDQVRALNQKLPPDERASAITIIEHSGPPPDAYQAYITES
SVACLLAVYYTLQTARSRDRVGLMRVLGCLSASEGDRAFDDTFLHTLVTLLIGMSDELAT
EDFCTVIFDEFFFTALARENVVQQLGKLLWHTHAKLPHARRETLMQALHHQPNLRPLLEQ
LREKMEKDECDVEMAPPPPPADSPLISVPTPAPHRGDYP
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgtccggaggtggactcgaagaaatcggtattccgggaaaggagtacctcagaaaggcc
ctgacaagctgttcagatcctttgaaggcaattggtgactttcaggccgagaatggcatc
ctgctgccgtcgctgcggccgatgctgccgctgctcgacctgcacggcgtcaagcggttc
gagttccacatgtccgtcatggagagtctgtgcgataagctgatccagcagatcaacgcc
attggccggctggagggccgcgagcgggacaagaagctgcgcgacctcctgcacaagtcg
ttcccggtcatcaggttcaagacgctgcggcccgtggtcatggccatcctcaaacacacc
cgcgaggtggaccacaagttcctcaaggtcttggtgcgtgacaaggagctctacaacgac
ctggacacggaggtgaagcgccagatctggacggatcaccagacgctgttcggagacgag
gtgtcgccgctcttcatccagtacgtgcaggagaaggaggcggcgctgctcacacacacc
aacctcaccaacttcttcgacctgacgcccaaggtgcggcggcaaggcgagatcatccag
aagatcgtgcacatgatcggccacagcgtcaagctttacgacatggtgctgcagtttctg
cgcacgctcttcgtcaagacgcgcaacgtgcactattgcactctgcgtgcggagctgctg
atggccctgcacgacctcgagatccaggagatcgtcgacgtggacccgtgccacaagttc
acctggtgcctggacgcctgtatccgggagcggaccgtggacaacaagcgcggccgcgag
ctgcagggcttcctcgactcgatcaggaagggcaacgaacagatcctcagcgacctgtct
atgatcctgtgcgacccgttcgccgtcaacttcctggcgacgtcggcgctgaagatcctg
gcgcagctcatcaacaacgagagcctgccgcgcgagcacactgtgctgctgctgctgctg
nncatgctggagctgggcctacacgcctgggacatgatcgaccggcaggagttccgcgag
ccgcggctggacccgcaggtggtcaccaagttcgtgccgtcgctcgtctcgctcatcgtc
gatgaccaggtgcgcgcgctcaaccagaagctgccgcctgacgagcgggcctcggccatc
accatcatcgagcactcgggcccaccgccggacgcctaccaggcgtacataaccgagtcg
agcgtggcctgcctgctggccgtctactacacactgcagacggcgcgcagtcgcgaccgc
gtgggtctgatgcgcgtgctcggctgcctgtcggccagcgagggcgaccgcgccttcgac
gacaccttcctgcacacactggtgacgctgctgatcgggatgtcggacgagctcgccacc
gaggacttctgcaccgtcatcttcgacgagttcttcttcacggcgctggcccgcgagaac
gtagtgcagcagctgggcaagcttctgtggcacacgcatgccaagctgccgcacgcgcgc
cgcgagaccctcatgcaggcgctccaccatcagcccaacctgcggccgctgctggaacag
ctgcgggagaagatggaaaaggatgagtgtgacgtcgagatggcgccaccgccgccgccc
gccgactccccgctgatatcggtaccgacgccagcgccgcaccgcggtgactatccgtaa

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