Pollicipes pollicipes (gooseneck barnacle): 119102572
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Entry
119102572 CDS
T08250
Name
(RefSeq) CDK-activating kinase assembly factor MAT1-like
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03022
Basal transcription factors
ppoi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119102572
09124 Replication and repair
03420 Nucleotide excision repair
119102572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoi03021
]
119102572
03400 DNA repair and recombination proteins [BR:
ppoi03400
]
119102572
Transcription machinery [BR:
ppoi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119102572
DNA repair and recombination proteins [BR:
ppoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119102572
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-UDP
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_4
zf-P11
TRAF3_RING
zf-C3HC4_2
zf-RING_6
DUF2400
Motif
Other DBs
NCBI-GeneID:
119102572
NCBI-ProteinID:
XP_037081870
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MDDEQVCPRCKTSKYRNPSMKLMVNVCGHPLCENCVNLLFAKGSGTCPQCDVPLRRNGFR
VQLFEDATVEKDIDIRRRILREFNKQEEEFASLRQYNDYLEDVETIIYNLANGVDVLATN
KKIEAYKRDNRESIVRNRARGRNEEDELDEILQLENELNEERQRDEHERLLAERRQKVEK
KEALIDELMTSYGDAKRIVADHTRAAEPAAEAAAPRPRAKPTQFSSGVRIGGARVGVLAP
AVPVDEGEPFVYERPTLPMDGPAPPEPERLAEAGYLTHVRLAGEAERAGGYAASLGCLRA
VQEAMAGLLFFPGGDG
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaacaggtgtgtccaagatgcaagaccagcaagtacagaaacccatctatg
aaacttatggtgaatgtgtgtggccatccactttgtgagaactgtgtcaatctccttttt
gccaaaggctcgggcacgtgcccgcagtgcgatgtgccgctgcgccgcaacggtttccgc
gtgcagctgttcgaggacgcgacggtggagaaggacatcgacatccggcggcggatactg
cgcgagttcaacaagcaggaggaggagttcgcctcactgcgccagtacaatgactacctg
gaagatgtggagaccatcatctacaacctggctaacggcgtcgatgtactggccaccaac
aagaagatcgaggcgtacaagcgcgacaaccgcgagtcaatcgtgcgcaaccgcgcgcgc
ggccgcaacgaggaggacgagctggacgagatcctgcagctggagaacgagctgaacgag
gagcgccagcgcgatgagcacgagcggctgctggccgagcggcgccagaaggtcgagaaa
aaagaggcgctcatcgacgagctgatgacctcgtacggggacgccaaaaggatcgtagcc
gaccacacgcgcgcggccgagccggcggcggaggcggcggcgccgcggccgcgcgccaag
cccactcagttctcgagcggcgtgcggatcggcggcgcgcgcgtgggcgtgctggcgcca
gcagtgccggtggacgagggtgagccgttcgtctacgagcggccgacgctgcccatggac
gggccggcgccgcccgagcccgagcggctggccgaggccggctacctgacgcacgtgcgg
ctcgccggcgaggcggagcgggccggcggctacgccgcctcgctcggctgcctgcgcgcc
gtgcaggaggcgatggctggtcttctgttcttccccggcggcgacggctga
DBGET
integrated database retrieval system
