Pollicipes pollicipes (gooseneck barnacle): 119102740
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Entry
119102740 CDS
T08250
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoi03021
]
119102740
Transcription machinery [BR:
ppoi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
119102740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
HEAT_2
HEAT_EZ
TPR_Trm732_C
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
119102740
NCBI-ProteinID:
XP_037082092
LinkDB
All DBs
Position
Unknown
AA seq
1788 aa
AA seq
DB search
MTTRLDRLFVLLESGSSALTRKAAAQQLGDVQRMHPHELYNLLDRVHQYLQSSSWDCRIA
AGQAVEAIVSSVPQWRPEPVAGCAEAAACPAERVPHVQLSLDTFRVDEVLETGPILTSLE
ACDMEQADGPDVSSQRLLLNKRLGLDVAEKLGLDTSSIFSNEDLATTPQQVELSSCSSRK
ASRRGRREGRRRCSPSSVPSPGSGEPAAKLARNDSPVPPRRQLSSYISVERWDESDEWPL
ECWCDLLCDDLMSPQWEVRHGAVTALRETLKVHGSGAGRQPGLSQQQMAERQRLRLEDLA
LRLVRLLALDRLGDYIGDQVVAPVRETAAQALGAVLRLLPLSSVWQLAGVLLALLDRTER
LRRLLHAVLQGLDDACDDVSAVAANCLVSSCDELVGLFPAATVSGIVATLWDSLTELDDL
MTSTPAVMELLATLSCQDVVADRTSLPSLVPRLWPFLGHTSSSVRRSAALTLSQLVHSQD
LETWSAEVIQMALRLTFQRALLEDQAAILDLLVKAWAGLVSRTSLATLLTATCPHIASWL
CILMQPTKMAISPGLLLAAPRLTRRPCSPGAVDPAVPSQCYRAAMRARLTGAALLGSLSP
YIVQPMPGAVYLVESPVSTYVALLSTHLTSLSAMQRAVVGHVIAEWVKAAPRFEFPDSLV
QRLHGCLAESVCFDETAVGFSRLQQDCRDYLALLKHYKLAVDAGFQSARVLSFEQIRQLT
GPVSAALLNSSRLSAKVMEKLQERRLSLQRSGAQVCDDHTGWSTRTQLALARAVILMNRL
TDKLNPVVRPVMESIKRETDPQLQDLAADGVVRLLELHRQRQSGPVSKIIRNLCAFSCCD
PLSTPCVQELRSDSRPGTPCSPDCQPAGAGPAPADARPPAELLGIVSLERLQQSEEDRSG
RRGSATRPPGRPSDVSAAAPAASSAAAQENNAALELQARTCPAAAEAFVSSCCPLVLLYL
ISHPSGVLLSREVQRRGACRALTAVCQRFGAALPDCLLELSLAQLDTVPPPDHAVQHLIN
GLQVTEVIVPALHPDIHHLALSRLDRLRDCLCHGHKAVRHMAARCLAALARLDLHCAATY
LVEHVLPLLGSGSSVATRQGAIEAVSCLVDSLWMDALPYIVLLVVPVLGRMSDRDTAVRL
LASRSFAAIIQLMPLEPGCGGAEAVPPHLAELKRAERRFLDQLMDPACIDQVAVPASVRA
QLRPYQRRGVSWLAFLNTYQLHGVLCDDMGLGKSLQSLCMLAVDQAARREQLRRGGGGAE
GALLPSLIVCPPTLTGHWMYEVEKFVDPSELSPLHYFGLPNERVRLQARLPQHNLVIVSY
DIVRNDLDFFSGVKWNYCILDEGHIIKNGKTKVARAIKQLDAMHRLILTGTPLQNSVLEL
WSLFDFLMPGFLGTEKQFTSRYSRPILLSRDAKANSREQEAGALAMEALHRQVLPFLLRR
LKEDVLDDLPPKITQDYYCELSDVQKRLYEAFTRSQAQLSLVEGLESAETGRSERAPAHV
FQALQYLRKVCNHPKLVLSEQHPSHTDVKEWLRAHDSTLDHIQHSAKLVALRQLLLDLGI
GEEAGAAPLAVDVVHPHRALIFCQLKSMLDIVERDLLQRHLPGVTYLRLDGAVPAGERQG
LVHRFNTDPSIDCLLLTTQVGGLGLNLVGADTVIFVEHDWNPMKDLQAMDRAHRIGQRRV
VNVYRLITRGTLEQKIMGLQKFKLMTANTVITSENSSLLTMGTDQLFDLFTLEAHRKEGG
AADGSRAPEARGIKAMLESLPELWEGEQYEQEYDLTSFMKTLRSNATP
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccagactggaccggctgttcgtgctgctggagagcggctcgtcggccctcacg
cgcaaggcggctgcccagcagctgggcgacgtccagaggatgcacccccatgagctgtac
aatctgctggacagggtgcatcagtacctgcagagcagctcgtgggactgccggatcgcc
gccggccaggcggtcgaggccatcgtcagcagcgtgccgcagtggcggcccgagcccgta
gccggctgcgcagaggcggccgcgtgcccggcggaacgcgtgccgcacgtgcagctcagc
ctggacacgttccgcgtggatgaggtgctggagacgggccccatcctcacctcgctggag
gcctgcgacatggagcaggccgacggaccggacgtctcctcccagcggctgctgctcaac
aagcgactgggtctggacgtggccgagaagctcggcctcgacacgtcctccatcttctcc
aacgaggacttggcgaccacgccgcagcaggtggagctgtcctcgtgctcgtcccgcaag
gcgagccgccgcggccggagggaggggcggcgtcggtgcagccccagtagcgtcccgtcg
cccgggtccggagagccggccgcgaagctggcccgcaacgactcgccggtgccacccagg
cgtcagctgtcctcctacatcagcgtcgagcggtgggacgagagtgacgagtggccgctg
gagtgctggtgtgatctgctctgcgacgacctgatgtcgccgcagtgggaggtgcgccac
ggcgccgtcaccgcgctgcgcgagacgctcaaggtgcacggctccggtgccggccggcag
ccgggcctctcacaacagcagatggccgagcggcagcgcctgcgcctggaggacctggcg
ctgcgcctggtgcgcctgctggcgctggaccggctcggggactacatcggcgaccaggtg
gtggcgccagtgcgcgagacggcggcgcaggcgctgggcgcggtgctgcgcctcctgccg
ctgtcgtcggtctggcagctggcgggcgtgctgctggcgctgctcgaccgcacggaacgg
ctgcgccgcctcctgcacgccgtgctgcagggactggacgacgcctgtgacgacgtgtcg
gccgtggccgccaactgcctggtgtcgtcctgtgacgagctggtcggcctcttcccggcc
gccaccgtgtccggcatagtggccacgctctgggactcgttgaccgagctggacgacctg
atgacctcgacgccggccgtcatggagctgctggccacactcagctgccaggacgtggtg
gccgacaggacttcgctgccgtcgctggtgcctcggctgtggccgttcctggggcacact
tcgtcgagcgtgcggcggtcggccgcccttaccctcagccagctggtccacagtcaggac
ctggagacgtggtcggcggaggtgattcagatggcgctgcgcctcaccttccagcgcgcc
ttgctggaggaccaagctgccatactggacctgttggtcaaggcgtgggccggcctggtc
agccgcacgtcgctcgccacgctgctgacggccacgtgtccgcacatcgcctcctggctg
tgcatcctgatgcagcccaccaagatggccatcagccccggcctgctgctggccgccccc
cgcctgacccgccggccgtgcagtccgggcgctgtggacccggctgtgccgagccagtgt
taccgggccgccatgcgcgcccgcctcaccggcgccgccctgctcggctcactcagcccc
tacatcgtccagcccatgcccggcgccgtgtacctggtcgagtcgcccgtcagcacgtat
gtggcgctgctctccacccatctgacctcactgtctgccatgcagcgcgcggtggtcggc
cacgtgatcgccgagtgggtcaaggcggcgccccggttcgagtttcccgactcgctcgtg
cagcgtctgcacggctgcctggccgagtcggtctgcttcgacgagacggccgtgggattt
tcgcggctgcagcaggactgccgcgactacctggctctgctcaaacactacaagctggcc
gtcgatgccggcttccagagcgcgcgcgtgctgagtttcgagcagatccgccagttgacc
gggccggtgtcggcggcgctgctcaacagcagccgcctgtcggccaaggtgatggagaag
ctgcaggagcggcggctgagcctgcagcgctcgggcgcgcaagtgtgcgacgaccacacc
ggctggtccaccaggacccagctggctctggcacgggctgtgattctgatgaaccggctc
accgacaagctgaacccggtagtgcggcccgtcatggagagcatcaaacgcgagactgac
ccccagctgcaggaccttgcggccgacggcgtggtccgcctgctggagctgcaccgccag
cgccagtcggggcccgtctccaagatcatcagaaacctctgtgccttcagctgctgtgat
cctctgagtacgccctgcgttcaggagctgcgctcggacagcaggccgggcacaccgtgc
tccccggactgccagccggccggcgccggccccgccccggctgacgcccgtccgcctgcc
gagctgctgggcatcgtcagcctggaaaggctacagcagagtgaggaggaccggtcgggt
cggcgcggctcggcgaccagaccgcccgggcgcccgagcgatgtcagcgccgccgctcca
gccgcttcctcggccgccgctcaagagaacaacgccgcgttagaactccaggcaagaaca
tgtccggccgccgctgaggcctttgtgtctagctgttgcccattggttcttttgtatctc
atttcccacccaagtggtgtcttgctcagccgtgaggtgcagcggcggggtgcctgccgc
gcgctgacggcggtctgccagcgcttcggcgccgcgctgccggactgccttttggagctg
tcgctggcgcagctggacaccgtgccgccgcccgatcacgccgttcagcacctcatcaac
ggcctccaggtcactgaggtcatcgtgccggcgttgcatcccgacatacaccatctggcg
ctctcccggctggaccggctgcgggactgcctgtgccacggccacaaggcggtgcgccac
atggccgcccgctgcctggccgccctggcccggctcgacctgcactgcgccgccacttac
ctcgtggagcacgtgctgccgctgctcggcagcggctcgagcgtggccacgcgccagggc
gccatagaagcagtcagctgcctagtcgactcgctctggatggacgcgctaccctatatc
gtgcttctcgtcgtacccgtgctcggtcgaatgtcggaccgggacacggccgtgcgtctg
ctggcgtcccgctcgttcgccgccatcatccagctgatgccgctggagccgggctgcggc
ggcgccgaggccgtgccgccgcacctggccgagctgaagcgcgccgagcgccgcttcctc
gaccagctgatggacccggcctgcatcgaccaggtggccgtgccggcgtcagtgcgcgcg
cagctacggccgtaccagcggcgcggtgtcagctggctcgccttcctcaacacgtaccag
ttgcacggcgtgctgtgcgacgacatgggtttgggcaagtcgctgcagagcctctgcatg
ttggcggtggatcaggccgcccgacgcgagcagctgcggcgcggcggcggcggcgctgag
ggtgcgctgctgccctccctcatcgtgtgcccgcccacgctcaccggccactggatgtac
gaggtggagaagttcgttgacccgagcgagctcagcccgctgcactacttcggccttccg
aacgagcgggtgcgcctgcaggcgcggctgccgcagcacaacctggtgatcgtctcctac
gacatcgtccgcaacgacctggacttcttctcaggcgtcaagtggaactactgcattctg
gatgaggggcacattatcaagaacggcaagaccaaggtggcccgcgccatcaaacagctg
gatgccatgcaccggctgatcctgacgggcacgccgctgcagaactctgtgctggagctg
tggtcgctgttcgacttcctgatgcctggcttcctgggcacggagaagcagttcacgtcg
cgctacagccggccgatcctgctgtcgcgcgacgccaaggccaactcgcgcgagcaggag
gccggagcgctggcgatggaggcgctgcaccgccaggtgctgcccttcctgctgcgccgc
ctgaaggaggacgtgctggacgacctgccgcccaagatcacgcaagactattactgcgag
ctgtctgacgtgcagaagcggctgtacgaggcgttcacgcgctcgcaggcgcagctctcg
ctggtggagggtctggagagcgctgaaacaggccgcagcgagcgcgcgccggcgcacgtg
ttccaggcgctgcagtacctgcgcaaggtgtgcaaccacccgaaactggtgctgagcgag
cagcacccgagccacacggacgtcaaggagtggctgcgcgcgcacgactcgacgctggac
cacatccagcactcggccaaactggtggcgctgcgccagctactgctggacctgggcatc
ggcgaggaggcgggcgcggcgccgctcgccgtcgacgtggtgcacccgcaccgggcgctc
atcttctgccagctcaagtcgatgctggatattgtggagcgcgacctgctgcagcgccac
ctgccgggcgtgacgtacctgcggctggacggcgctgtgccggcgggcgagcgccagggc
ctggtgcaccgcttcaacacggacccgagcatcgactgcctgctgctgaccacgcaggtg
ggcgggctgggcctgaacctggttggcgccgacaccgtcatcttcgtcgagcacgactgg
aacccgatgaaggaccttcaggcgatggaccgcgcgcaccgcatcggccagcggcgcgtg
gtcaacgtgtaccggctgatcacgcgcggcacgctcgagcagaagattatgggcctgcag
aagttcaagctcatgacggccaacactgtcatcaccagcgagaacagcagcctgctcacc
atgggaaccgaccagctgttcgacctgttcacgctggaggcgcaccgcaaggagggcggc
gcggccgacgggtcgcgcgctcccgaggcacggggcatcaaggccatgctcgagtcgctg
cccgaactgtgggaaggagagcagtacgagcaggagtacgacctgaccagtttcatgaag
accctacgctcgaatgcgacgccctga
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integrated database retrieval system
