Pollicipes pollicipes (gooseneck barnacle): 119102741
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Entry
119102741 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoi03021
]
119102741
Transcription machinery [BR:
ppoi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
119102741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3535
Helicase_C
HEAT
HEAT_EF3_N
HEAT_EZ
ResIII
TPR_Trm732_C
Motif
Other DBs
NCBI-GeneID:
119102741
NCBI-ProteinID:
XP_037082093
LinkDB
All DBs
Position
Unknown
AA seq
1362 aa
AA seq
DB search
MSPQWEVRHGAVTALRETLKVHGSGAGRQPGLSQQQMAERQRLRLEDLALRLVRLLALDR
LGDYIGDQVVAPVRETAAQALGAVLRLLPLSSVWQLAGVLLALLDRTERLRRLLHAVLQG
LDDACDDVSAVAANCLVSSCDELVGLFPAATVSGIVATLWDSLTELDDLMTSTPAVMELL
ATLSCQDVVADRTSLPSLVPRLWPFLGHTSSSVRRSAALTLSQLVHSQDLETWSAEVIQM
ALRLTFQRALLEDQAAILDLLVKAWAGLVSRTSLATLLTATCPHIASWLCILMQPTKMAI
SPTRRPCSPGAVDPAVPSQCYVGGPAAATAGGAERERAAMRARLTGAALLGSLSPYIVQP
MPGAVYLVESPVSTYVALLSTHLTSLSAMQRAVVGHVIAEWVKAAPRFEFPDSLVQRLHG
CLAESVCFDETAVGFSRLQQDCRDYLSARVLSFEQIRQLTGPVSAALLNSSRLSAKVMEK
LQERRLSLQRSGAQVCDDHTGWSTRTQLALARAVILMNRLTDKLNPVVRPVMESIKRETD
PQLQDLAADGVVRLLELHRQRQSGPVSKIIRNLCAFSCCDPLSTPCVQELRSDSRPGTPC
SPDCQPAQREVPRQGVSRADLTLAMSGSARCATWPPRCLAALARLDLHCAATYLVEHVLP
LLGSGSSVATRQGAIEAVSCLVDSLWMDALPYIVLLVVPVLGRMSDRDTAVRLLASRSFA
AIIQLMPLEPGCGGAEAVPPHLAELKRAERRFLDQLMDPACIDQVAVPASVRAQLRPYQR
RGVSWLAFLNTYQLHGVLCDDMGLGKSLQSLCMLAVDQAARREQLRRGGGGAEGALLPSL
IVCPPTLTGHWMYEVEKFVDPSELSPLHYFGLPNERVRLQARLPQHNLVIVSYDIVRNDL
DFFSGVKWNYCILDEGHIIKNGKTKVARAIKQLDAMHRLILTGTPLQNSVLELWSLFDFL
MPGFLGTEKQFTSRYSRPILLSRDAKANSREQEAGALAMEALHRQVLPFLLRRLKEDVLD
DLPPKITQDYYCELSDVQKRLYEAFTXCSQAQLSLVEGLESAETGRSERAPAHVFQALQY
LRKVCNHPKLVLSEQHPSHTDVKEWLRAHDSTLDHIQHSAKLVALRQLLLDLGIGEEAGA
APLAVDVVHPHRALIFCQLKSMLDIVERDLLQXHLPGVTYLRLDGAVPAGERQGLVHRFN
TDPSIDCLLLTTQVGGLGLNLVGADTVIFVEHDWNPMKDLQAMDRAHRIGQRRVVNVYRL
ITRGTLEQKIMGLQKFKLMTANTVITSENSSLLTMGTDQLFDLFTLEAHRKEGGAADGSR
APEARGIKAMLESLPELWEGEQYEQEYDLTSFMKTLRSNATP
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgcagtgggaggtgcgccacggcgccgtcaccgcgctgcgcgagacgctcaag
gtgcacggctccggtgccggccggcagccgggcctctcacaacagcagatggccgagcgg
cagcgcctgcgcctggaggacctggcgctgcgcctggtgcgcctgctggcgctggaccgg
ctcggggactacatcggcgaccaggtggtggcgccagtgcgcgagacggcggcgcaggcg
ctgggcgcggtgctgcgcctcctgccgctgtcgtcggtctggcagctggcgggcgtgctg
ctggcgctgctcgaccgcacggaacggctgcgccgcctcctgcacgccgtgctgcaggga
ctggacgacgcctgtgacgacgtgtcggccgtggccgccaactgcctggtgtcgtcctgt
gacgagctggtcggcctcttcccggccgccaccgtgtccggcatagtggccacgctctgg
gactcgttgaccgagctggacgacctgatgacctcgacgccggccgtcatggagctgctg
gccacactcagctgccaggacgtggtggccgacaggacttcgctgccgtcgctggtgccc
cggctgtggccgttcctggggcacacttcgtcaagcgtgcggcggtcggccgccctcacc
ctcagccagctggtccacagtcaggacctggagacgtggtcggcggaggtgattcagatg
gcgctgcgcctcaccttccagcgcgccttgctggaggaccaagctgccatactggacctg
ttggtcaaggcgtgggccggcctggtcagccgcacgtcgctcgccacgctgctgacggcc
acgtgtccgcacatcgcctcctggctgtgcatcctgatgcagcccaccaagatggccatc
agcccgacccgccggccgtgcagtccgggcgctgtggacccggctgtgccgagccagtgt
tacgtgggcgggccggcggcggcgacggccggcggtgcggagcgcgagcgagccgccatg
cgcgcccgcctcaccggcgccgccctgctcggctcgctcagcccctacatcgtgcagccc
atgcccggcgccgtgtacctggtcgagtcgcccgtcagcacgtatgtggcgctgctctcc
acccatctgacctcactgtctgccatgcagcgcgcggtggtcggccacgtgatcgccgag
tgggtcaaggcggcgccccggttcgagtttcccgactcgctcgtgcagcgtctgcacggc
tgcctggccgagtcggtctgcttcgacgagacggccgtgggattttcgcggctgcagcag
gactgccgcgactacctgagcgcgcgcgtgctgagtttcgagcagatccgccagttgacc
gggccggtgtcggcggcgctgctcaacagcagccgcctgtcggccaaggtgatggagaag
ctgcaggagcggcggctgagcctgcagcgctcgggcgcgcaggtgtgcgacgaccacacc
ggctggtccaccaggacccagctggctctggcacgggctgtgattctgatgaaccggctc
accgacaagctgaacccggtagtgcggcccgtcatggagagcatcaaacgcgagactgac
ccccagctgcaggaccttgcggccgacggcgtggtccgcctgctggagctgcaccgccag
cgccagtcggggcccgtctccaagatcatcagaaacctctgtgccttcagctgctgtgat
cctctgagtacgccctgcgttcaggagctgcgctcggacagcaggccgggcacgccgtgc
tccccggactgccagccggctcagcgtgaggtgccgcggcagggtgtgtctcgtgctgac
ttgaccctcgccatgtcaggctcagcgcggtgcgccacatggccgccccgctgcctggcc
gccctggcccggctcgacctgcactgcgccgccacttacctcgtggagcacgtgctgccg
ctgctcggcagcggctcgagcgtggccacgcgccagggcgccatagaagcagtcagctgc
ctagtcgactcgctctggatggacgcgctgccctatatcgttcttctcgtcgtgcccgtg
ctcggtcgaatgtcggaccgggacacggccgtgcgtctgctggcgtcccgctcgttcgcc
gccatcatccagctgatgccgctggagccgggctgcggcggcgccgaggccgtgccgccg
cacctggccgagctgaagcgcgccgagcgccgcttcctcgaccagctgatggacccggcc
tgcatcgaccaggtggccgtgccggcgtcagtgcgcgcgcagctacggccgtaccagcgg
cgcggtgtcagctggcttgccttcctcaacacgtaccagttgcacggcgtgctgtgcgac
gacatgggtttgggcaagtcgctgcagagcctctgcatgttggcggtggatcaggccgcc
cgacgcgagcagctgcggcgcggcggcggcggcgccgagggtgcgctgctgccctccctc
atcgtgtgcccgcccacgctcaccggccactggatgtacgaggtggagaagttcgttgac
ccgagcgagctcagcccgctgcactacttcggccttccgaacgagcgggtgcgcctgcag
gcgcggctgccgcagcacaacctggtgatcgtctcctacgacatcgtccgcaacgacctg
gacttcttctcaggcgtcaagtggaactactgcattctggatgaggggcacattatcaag
aacggcaagaccaaggtggcccgcgccatcaaacagctggatgccatgcaccggctgatc
ctgacgggcacgccgctgcagaactctgtgctggagctgtggtcgctgttcgacttcctg
atgcctggcttcctgggcacggagaagcagttcacgtcgcgctacagccggccgatcctg
ctgtcgcgcgacgccaaggccaactcgcgcgagcaggaggccggagcgctggcgatggag
gcgctgcaccgccaggtgctgcccttcctgctgcgccgcctgaaggaggacgtgctggac
gacctgccgcccaagatcacgcaagactattactgcgagctgtctgacgtgcagaagcgg
ctgtacgaggcgttcacgnnctgctcgcaggcgcagctctcgctggtggagggtctggag
agcgctgaaacaggccgcagcgagcgcgcgccggcgcacgtgttccaggcgctgcagtac
ctgcgcaaggtgtgcaaccacccgaaactggtgctgagcgagcagcacccgagccacaca
gacgtcaaggagtggctgcgcgcgcacgactcgacgctggaccacatccagcattcggcc
aaactggtggcgctgcgccagctactgctggacctgggcatcggcgaggaggcgggcgcg
gcgccgctcgccgtcgacgtggtgcacccgcaccgggctctcatcttctgccagctcaag
tcgatgctggatattgtggagcgcgacctgctgcagncgcacctgccgggcgtgacgtac
ctgcggctggacggcgctgtgccggcgggcgagcgccagggcctggtgcaccgcttcaac
acggacccgagcatcgactgcctgctgctgaccacgcaggtgggcgggctgggcctgaat
ctggttggcgccgacaccgtcatcttcgtcgagcacgactggaacccgatgaaggacctt
caggcgatggaccgcgcgcaccgcatcggccagcggcgcgtggtcaacgtttaccggctg
atcacgcgcggcacgctcgagcagaagattatgggcctgcagaagttcaagctcatgacg
gccaacactgtcatcaccagcgagaacagcagcctgctcaccatgggaaccgaccagctg
ttcgacctgttcacgctggaggcgcaccgcaaggagggcggcgcggccgacgggtcgcgc
gctcccgaggcacggggcatcaaggccatgctcgagtcgctgcccgaactgtgggaagga
gagcagtacgagcaggagtacgacctgaccagtttcatgaagaccctacgctcgaatgcg
acgccctga
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