Pollicipes pollicipes (gooseneck barnacle): 119102883
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Entry
119102883 CDS
T08250
Name
(RefSeq) cleavage and polyadenylation specificity factor 73-like
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119102883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoi03021
]
119102883
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119102883
Transcription machinery [BR:
ppoi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119102883
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119102883
U7-dependent histone pre-mRNA processing factors
119102883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_3
Lactamase_B_2
Gp58
Motif
Other DBs
NCBI-GeneID:
119102883
NCBI-ProteinID:
XP_037082231
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MDELDQLLIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPFVDMINAEEVD
LLLVSHFHLDHCGSLPWFLQKTTFKGRCFMTHATKAIYRWLLADYIKVSNIATEQMLYTE
ADLEATMDKIETINFHEEKDVRGVKFWAYHAGHVLGAAMFMIEIAGVKILYTGDFSRQED
RHLMVAEMPTIQPDVLIIESTYGTHIHEKREDRESRFTGVVHDIVQRGGRCLIPVFALGR
AQELQLILDEYWAQHPELHDVPIYYASSLAKKCMAVYQTYVNAMNERIRRQIAVNNPFVF
KHIQNLKGIDHFDDVGPCVIMASPGMMQSGLSRELFESWCTDPKNGVIIAGYCVEGTLAK
HLLSEPDEVNTMSGQKLPLKMSVDYISFSAHTDYAQTSDFIQQLRPPHIVLVHGEQNVMS
RLKEALLREYAADPQRGAVQIHNPRNTVAVTLHFRGEKMAKVMGTLAMEPPTDGRHLAGV
LVKRNFSYHLLSPDELGKYTDMTQSQVSQRLSVHFSGSPQLLQYVLSNIAADFEPAKGRH
QWRLFKAVTVTLDGQTAVLEWVASPGADMLADAVLAAVLKAETTRVDAPTRPLKFDRMHY
KECLIETLQEMFGDESVPKFFKGDKFYVTCGGRRADIDLADMTVTCEDDEIFRNTVHTAV
TKLYQSLAPARLN
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctggaccagctgctgatccggcccctgggcgccggccaggaggtgggccgc
tcctgcatcatgctcgagttcaagggcaagaagatcatgctcgactgtggcatccacccg
ggcctctctggcatggacgcgctgccctttgttgacatgatcaacgccgaggaggtggac
ctgctgctggtgagtcactttcacttggaccactgcggctcgctgccctggttcctgcag
aaaaccacgttcaagggccgctgcttcatgacgcacgccactaaggccatctaccgctgg
ctgcttgccgactacatcaaggtgtccaacatcgccaccgagcagatgctgtacacggag
gccgacctggaggccaccatggacaagatcgagaccatcaacttccacgaggagaaggac
gtgcgtggcgtcaagttctgggcgtaccacgccggccacgtgctcggcgccgccatgttc
atgatcgagatcgccggcgtcaagatcctgtacacgggcgacttctcgcgccaggaggac
cgccacctgatggtggccgagatgccgaccatccagccggacgtgctcatcatcgagtcg
acgtacggcacgcacatccacgagaagcgcgaggaccgcgagagtcggttcacgggcgtg
gtccacgacatcgtgcagcgcggcggccgctgcctgatcccggtgttcgcgctcggccgc
gcgcaggagctgcagctgatcctggacgagtactgggcgcagcacccggaactgcacgac
gtgcccatctactacgcctcgtcgctcgccaagaagtgcatggccgtgtaccagacgtac
gtgaacgccatgaacgagcgcatccgccgtcagatcgccgtcaacaacccgttcgtgttc
aagcacatccagaacctgaagggcatcgaccacttcgacgacgtcgggccgtgcgtcatc
atggcctcgccgggcatgatgcagagtggcctgtcgcgcgagctcttcgagtcgtggtgc
accgaccccaagaacggcgtcatcatcgccggctactgcgtcgagggcacgctggccaag
caccttctctcggagccggacgaggtgaacaccatgtccggccagaagctaccgctcaag
atgtccgtcgactatatctcgttctcggcgcacaccgactacgcgcagacgtccgacttc
atccagcagctgcgcccgccgcacatcgtgctggtgcacggcgagcagaacgtgatgtcg
cgcctgaaagaggcgctgctgcgcgagtacgccgccgacccgcagcgcggcgccgtccag
atccacaacccgcgcaacactgtggccgtgacgctgcacttccgcggcgagaagatggcc
aaggtgatgggcacgctggccatggagccgcccaccgacggccgccacctcgccggcgtg
ctggtcaagcgcaacttcagctaccacctgctctcgcccgacgagctcggcaagtacacg
gacatgacgcagagccaggtgtcgcagcggctgagcgtgcacttctccggctcgccgcag
ctgctgcagtacgtgctgtccaacatcgcggccgacttcgagccggccaagggccgccac
cagtggcgcctgttcaaggccgtcaccgtcacgctggacggccagacggccgtgctcgag
tgggtggccagtccgggcgccgacatgctggccgacgccgtgctggcggccgtgctgaag
gccgagacgacgcgcgtcgacgcgcccacgcggccgctcaagttcgaccgcatgcactac
aaggagtgtctgatcgagacgctgcaggagatgttcggcgacgagtcggtgcccaagttc
ttcaagggcgacaagttctacgtaacgtgtggcgggcggcgcgcggatatcgacctggcc
gacatgacggtcacgtgcgaggacgacgagatcttccgcaacacggtgcacacggccgtc
accaagctgtaccagtcgctggcgcccgcccggctcaactga
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integrated database retrieval system
