Pollicipes pollicipes (gooseneck barnacle): 119103033
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Entry
119103033 CDS
T08250
Name
(RefSeq) mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03430
Mismatch repair
ppoi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119103033
03460 Fanconi anemia pathway
119103033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppoi03400
]
119103033
DNA repair and recombination proteins [BR:
ppoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
119103033
BRITE hierarchy
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
119103033
NCBI-ProteinID:
XP_037082380
EnsemblRapid:
LOC119103033
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MHNVHWPHGHYLLAAHRAGPTLSKMDLPSSAGSSIKRIDKGTVHNICSGQVIVSLRSAVK
ELVENALDAGATSVEVHLRDHGTASIEVVDNGAGIHEDDFEAVGLKHHTSKLREFADLPG
VSTFGFRGEALGSLCALADVAVVTRHRAAAVGHRLRFSADGRIAERTPVPRQVGTTVTVR
DLFAPLPVRRRQFCGRARRELTDLLHTLWGYGLVTAGVRLVCSHQTADGRRSVLLTSSVS
AALADRVTALFGQKQLASLVPLVSTVPTDATRQEFGLAAADRAADVTVKGLISSCEHGKG
RSASDRQFVFINGRPCDHTKIARLVNEVYRTHNRHQSPFFVLDVTLARERVDVNVTPDKR
MMFVQNEKYLLASIKETLTKCFEGLPSSYTVASHLQSQSPASPSVTSPQPLTSPTLAGAW
ISAIKRSIKKCDKPASPVKRQCLDRFFTRITASPASDGDADFRPATDAESASPRLTRHPP
PSDSCSASGGTMMTAAPVSAPAPGLASCLPLWEAQAAGDSTACCLTNSALLPAAPAASQA
APSPAGGDGPPSEGSCLVADGVTSPTAVAAKEDRAGAGGAPESWTVPSGGAEGVGRDTRT
CLDGTRGQAQVARGRRWRERGRGVGGAPKRRSRKSRRTGGGGGSPPRQLPPAGGRVSCSP
GAVITDSSEGDTMANARKRTRLAFSMDELRRQVATLETPCSEAGDAGREWRFRATIQPSE
NSAAEQELKLQIKKEDFLEMEVLGQFNLGFLVTRLGEDLFLIDQHASDEKFNFERLSRQP
LAKQPLVVPQELELPAVSEETLLSRPEPFAEAGFQVSVDESAPPGRRLRLLAAPAVQGVV
CGRADLEELIWLVQESPGPLTAIRPSRVRAVLASRACRTSVMIGTALSPAGMTRLVRNMA
DMEQPWNCPHGRPTMRHLVCLSLLRS
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacgtccactggcctcatggtcattatctcctggcagcgcatcgtgcggggcct
acactctcaaaaatggatttgcctagcagtgcaggttcctcaatcaagagaattgataaa
ggcactgtacataacatatgctctggacaagtgatcgtcagtctccggtcagccgtgaag
gagctggtagagaacgcgctggacgccggtgccacgtcagtggaggtccacctgcgcgac
catggcaccgcctccattgaagttgtcgacaatggtgccggcatccatgaggacgacttc
gaagccgtggggctgaagcaccacacctcgaagctgcgcgagtttgccgatctgcccggc
gttagtacgtttggcttccgcggggaggcgctggggtcgctgtgcgctctggccgacgtc
gccgtggtgacgcgccaccgcgcggccgccgtcggccaccgactgcgcttctctgccgat
ggccggatcgcggagcggacgccggtgcccagacaggtggggacgacggtgacggtgcgc
gacctgttcgcgccgctgccggtgcggcggcgccagttctgcggccgcgcgcgccgcgag
ctcacggacctgctgcacaccctctggggctacggcctggtcaccgccggcgtcaggctc
gtgtgctcgcaccagacggccgacggcaggaggagcgtgctgctgacgtcatccgtcagc
gccgcgctcgctgaccgcgtgacggcgctgttcggccagaagcagctggccagtctggtg
ccgctcgtgtcgaccgtgccgacggacgccacgcgacaggagttcggcctggccgccgcc
gacagggccgccgatgtcacggtcaagggtctgatctcctcctgtgagcacggcaaggga
aggagcgcatccgaccgccagttcgtctttatcaacggccggccctgtgaccacaccaag
atagcccgcttggtcaacgaggtgtaccgtacgcacaaccggcaccagagtccgttcttc
gtcctggacgtgacgctggcccgtgagagggtggacgtgaacgtcacgcccgacaagcgt
atgatgttcgtccagaacgagaagtacctgctggcctccatcaaggagacgctgaccaag
tgcttcgaaggtctgccgtcatcctacaccgtcgcctctcaccttcaaagccaatcgccg
gcctctccatccgtgacgtcacctcagccgttgacgtcgccaacgttagctggggcctgg
atatcggccatcaagcgaagcattaagaagtgtgataagccggccagtcccgtcaagcga
cagtgcctcgaccgtttcttcacgcgcattacggcgtcaccagcgtcggacggcgacgcc
gacttccgtcccgccacggacgcagagagcgccagcccccgtctgacgagacatccacct
ccgtcggactcgtgctctgccagtggcggcaccatgatgacggcagcaccggtgtcagca
ccagcacctggcctggcgagctgtctgccgctgtgggaggcccaggccgccggcgacagc
accgcctgctgcctgacgaacagtgctctgctgccggccgcacccgccgccagccaggcc
gccccgagcccggcaggcggtgacgggccgccgtccgaaggcagctgcttggtggcggac
ggggtgacgtcgccaacggcagtggccgcgaaggaggacagagcaggcgccggcggggcg
ccagagtcttggactgtgccttcgggcggcgccgagggcgtcggccgggacacgcggacg
tgcctggacgggacacgcggccaggcgcaggtggcgagggggcggcgctggcgagagcgg
gggcgaggcgtcggcggcgcgccgaagcgacgttctcggaagtcccggcggactggaggg
ggcggcggctcgccaccacggcagctgcctccggccggggggagggtgtcgtgctcaccc
ggggccgtcatcaccgactcgtcggaaggtgacaccatggctaacgccaggaaacggacc
cgcttggcgtttagcatggacgagctcaggcgccaggtagccacgttggaaacaccgtgt
tcggaggcgggtgatgccgggcgggagtggcggtttcgggccaccatccaaccgtccgaa
aattcagcggcggaacaggagctgaagctgcagataaaaaaggaggacttcttagagatg
gaggtgctgggccagttcaacctgggcttcctggtgacccggctgggtgaggacctgttc
ctcatcgaccagcacgccagcgacgagaagttcaactttgagcgactgagtcgccagccg
ctggccaagcagccgctcgtggttccgcaggagctggagctgccggccgtctccgaggag
acgctgctgtcgcgaccggagccgttcgccgaggccggcttccaggtgtcggtggacgag
tcggcgccgcccggccgccggctgcggctgctggcggcgccggccgtccagggcgtggtc
tgtggccgcgccgacctggaggagctcatctggctggtgcaggagtcaccgggcccgctg
accgcgatcaggccgtcccgggtgcgcgctgtgctggcgtcgcgcgcgtgccgcacctcc
gtgatgatcggcacggcgctctccccggccggcatgacgcgcctcgtgcgcaacatggct
gacatggagcagccctggaactgtccccacggacgccccaccatgcgacatctggtctgt
ttgagtctgctccggtcctga
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