Pollicipes pollicipes (gooseneck barnacle): 119103167
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Entry
119103167 CDS
T08250
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119103167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119103167
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119103167
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
NSs
Motif
Other DBs
NCBI-GeneID:
119103167
NCBI-ProteinID:
XP_037082511
LinkDB
All DBs
Position
Unknown
AA seq
314 aa
AA seq
DB search
MSDENEDQWLYGSNPPPPEDVAMTDQPAEVATDTDAKPSDPENAPETKGTDGVKEDSVNP
DEANLDITEDGDKTDDKKDPGSTDPMLEDIDDDSDDDVNVVIRDIPAPSAYSGFKIGKGS
AQFSTPASTDKTKGQGNFAVNEFDGVGTINGVPAHEFNLDSLEDKPWRKPGADITDYFNY
GFNEDTWRAYCERQKRMRLNESGAGIANLPVKPFQAGTSEKYASKVAQPPVRRYQGTIDV
IGATAPSRRYEGDGPPVANFSLPPPMAPVPSYSAPPPGFGFPPAAPPPFYEPAYVPGQAW
NNPPPPQQQELSLT
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgagaacgaagaccaatggttgtacggcagcaacccgccgccacccgaagac
gtggccatgaccgatcagcctgccgaggtcgcgaccgacactgacgccaagcccagtgac
cccgagaacgctccggagacgaaagggaccgatggcgtcaaagaggattcggtaaaccca
gacgaagccaacttggacattactgaagatggagacaagactgatgataaaaaggacccg
gggagtacggatcctatgctagaagacattgacgacgacagcgacgatgacgttaacgtc
gttattcgcgacattccggcgccgtcggcctacagcggcttcaagatcggcaagggctct
gcgcagttcagcacgccggcatcgaccgacaaaacgaagggccagggcaattttgccgtc
aacgagtttgacggagtgggaaccatcaatggagtgcccgcgcatgagttcaacctggac
tcgctggaggacaagccgtggaggaaaccgggcgcggacatcacagactacttcaactac
ggcttcaacgaggacacctggcgcgcctactgcgagcgacagaagcgcatgcgcctcaac
gagtcgggggccgggatcgccaacctgccggtcaagccgttccaggcgggcaccagcgag
aagtacgcgtcgaaggtggcgcagccgccggtacggcgctaccaggggaccattgacgtc
atcggagccacggcgccgagccgacgctacgagggcgacgggccgccggtggccaacttc
tcgctgccgccgccgatggcgcccgtgcccagctactcggcgccgccgcccggcttcggc
ttcccgccggcggcgccgccgcccttctacgagccggcctacgtgccgggccaggcctgg
aacaacccgccgccgccgcagcagcaagaactgagcttgacgtaa
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