KEGG   Pollicipes pollicipes (gooseneck barnacle): 119103533
Entry
119103533         CDS       T08250                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 48-like
  KO
K15361  WD repeat-containing protein 48
Organism
ppoi  Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ppoi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    119103533
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppoi03400]
    119103533
DNA repair and recombination proteins [BR:ppoi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     119103533
SSDB
Motif
Pfam: DUF3337 WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_RIG_2nd WD_LRWD1 Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_Vps41 WDR54 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_WDR75_2nd RAWUL Beta-prop_NUP159_NUP214 Ribosomal_60s
Other DBs
NCBI-GeneID: 119103533
NCBI-ProteinID: XP_037083008
LinkDB
Position
Unknown
AA seq 680 aa
MEGGGAMGTMQRSAVLSGRKRFQVTYVIRDEVERRHRAGVNSLQYDAHLQRLFTAGRDGV
IRMWNCKNAKEPYIQSMEHHTDWVNDIVLCCGGRNLISASSDTTVKVWSAHKGLCMSTLR
THKDYVKALAYAREKEHVASAGLDKSIFLWDVNTLTALTTSNNIVTTSSLNGSKFSIYSL
GMNELGTVVIAGSTEKLLRVWDPRTCDRLMKLRGHADNVRAVLVSRDGTQCLSGSSDGTV
KLWSLGQQRCITTLQLHDSVWALQVSHDFSRVYSGGRDRRLLVTSLRKPDTSVLLAEESA
SVLRMALVGDESLWVSTSESSVKNWSLKNVEKRLEDASYDFLTPLATSPGRVIEGAPSIK
QYKVLNDKRHVLTRDSDGHVALYDVLHAKKVEELGQADLDAEAERRFKMVYVPSWFSVDL
KTGYLSVHLSQDEIDCFSAWVSAKDAGLQTSDGVDQKVNYGRLLLQALLEHWPRTFQAEP
GTEHTPDGQAMAKPVGNEYFSVPPHTPVIFSEAGGRFFYRLLCRDAVGESEGTLNEMVPD
WVVDCVVERNTPKFIKVPFYLQPHASASSSIKNQKKDRLIANDFIQVRKVVEHVFEKVLG
ASSEGGGVAAGGSGGGAAAAAAAAGGAEPAERAESASLAEDRVELLCNDQVLDLNMDLRT
VRHFIWKNSADLQLHYRQIK
NT seq 2043 nt   +upstreamnt  +downstreamnt
atggaaggcggcggcgctatgggcaccatgcagcgctcagcggtgctgagcggccgcaag
cgcttccaggtgacctacgtgatccgcgatgaggtggagcgtcggcaccgggccggcgtc
aactcgctgcagtacgacgcccatctgcagcggctcttcaccgctggccgcgacggcgtc
atcaggatgtggaactgtaagaatgccaaggaaccttacatacagtcgatggagcaccat
accgactgggtgaacgacattgtcctgtgttgcggcggtagaaacttgatctcggccagc
tcggacacgacggtcaaagtgtggagcgcccacaaaggcctctgcatgtccacgctgcgc
acgcacaaggactacgtcaaggcgctggcctacgcccgggagaaggagcacgtggcgtcg
gccggtctggacaagtccatcttcctctgggacgtgaacacgctgactgcactcaccacc
agtaataacatcgtgaccacgtcgtcgctgaacggcagcaagttcagcatctacagcctg
ggcatgaacgagctgggcacggtggtgatcgccggcagcaccgagaagctgctgcgcgtg
tgggatccgcgcacctgcgaccgcctcatgaagctgagaggccacgccgacaacgtgcgc
gccgtgctggtgagccgggacggcacgcagtgtctgtcgggctcctcggacggcaccgtc
aagctctggtcgctcggtcagcagcgctgcatcaccactctccagctgcacgactcggtt
tgggcgctacaggtgagtcacgacttcagccgcgtgtactcgggcggtcgcgaccggcgg
ctgctggtcaccagcctacgcaagcccgacaccagcgtgctgctggccgaggagtcggcc
tccgtgctgcgcatggcgctggtcggcgacgagtcgctctgggtctccacctccgagagc
tccgtcaaaaactggtctttgaagaatgttgaaaagcggctggaggacgcctcatacgac
ttcctgaccccgctcgcgaccagccccggtcgggtgatcgagggcgcgcccagcatcaaa
cagtacaaagttctcaacgataaacgccacgtgttgacccgggacagcgacggtcacgtg
gccctgtatgacgtgctgcacgccaagaaggtggaggagctgggtcaggccgacctggac
gccgaggccgagcggcgcttcaagatggtctacgtccccagctggttcagtgtcgacctc
aaaactggctacctgtcggtgcacctcagccaggacgagatcgactgtttctcggcctgg
gtcagcgccaaagacgctggactgcagacctccgacggcgtcgaccagaaagtgaactac
ggccggctgctgctgcaggcgctgctggagcactggccgcgcacgttccaggccgagccc
ggcacggagcacacgcccgatggacaggccatggccaagccggtcggcaacgagtacttc
tcggtgccgcctcacacgcccgtcatattcagcgaggccggcggccggtttttctaccgt
ctgctgtgccgagacgccgtcggggagtcggagggcacactcaatgagatggtgcccgac
tgggtggtcgactgcgtggtggagcgcaacacgcctaagttcatcaaggtgccgttctac
ctgcaaccacacgcttcagcctccagcagcataaagaatcagaaaaaggaccggctcatc
gcgaacgactttatccaggtgcgcaaggtggtggagcacgtgttcgaaaaggtgctgggc
gcgagctcggagggcggcggcgttgcggccggcggcagcggcggcggcgcggccgcagcg
gcagcagcggcgggcggcgccgagccggccgagcgcgccgagagtgctagcctggcggag
gaccgagtcgaactgctctgcaacgaccaggttctggacctgaatatggacctgcggaca
gtgcgacacttcatctggaagaactcggccgacttgcagctgcactaccgccagataaag
tag

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