Pollicipes pollicipes (gooseneck barnacle): 119103578
Help
Entry
119103578 CDS
T08250
Name
(RefSeq) pre-mRNA-processing factor 6-like
KO
K12855
pre-mRNA-processing factor 6
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119103578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppoi03041
]
119103578
Spliceosome [BR:
ppoi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
119103578
Complex C
U5 SnRNP specific factors
119103578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
HAT_PRP39_C
Suf
TPR_17
HAT_Syf1_CNRKL1_N
UTP6_C
CAF1A_acidic
LPD22
Motif
Other DBs
NCBI-GeneID:
119103578
NCBI-ProteinID:
XP_037083059
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MSAPNVPHPSALVAKAKKTFIGLPSPLGYVAGVGRGATGFTTRSDIGPARQATDVSDERH
AAPPKRRKKDDEDDETDLNESNYDEFTGYGGSLFNKDPYDKDDEEADAIYDAVDERMDEK
RKEYREKKLKEELERYRAERPKIQQQFSDLKRDLVQVSKDDWDNLPEVGDARNRKQRAPR
AEKFTPLPDSVLGRSLGGESVHSIDASSGLASIVPGTASMAPGMVTPSGDLDLRKIGQAR
NTLMNVKLNQVSDSVSGQTVVDPKGYLTDLQGMIPNFSSDINDIKKARLLMKSVRETNPQ
HPPAWIASARLEEVTGKLQNARNLIMKGCEACPNAEDVWLEAARLQPPDTAKGVVAQAVR
QLPNSVRLWLKAADLELELKGKRRVFRKALELQPNSVRLWKAAVELEEAEDARILLSRAV
ECCPTAVELWLALARLETYENARKVLNKARENVPTDRQIWLSAAKLEEANDNAPMVVRIV
ERAIASLSANGVEINREFWLKDAVQCERAGSALTCQAVITAVIGYGVEEEDRKSQWMEDA
EACAAQGAVECARAIYAHALAAYPSKKSIWLAAAYFEKSHGTRESLETLLQQAVLHCPRA
EVLWLMGAKSKWLARDVPAARSILSMAFQANPNSEEIWLAAVKLESENNEYERARKLLSK
ARSSAPTPRSVAARAAGTAVCLPQRGASLELICKSWLVTAAAFNRFFRRTCYRG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgccgaacgttccgcatccatcggcccttgtggctaaagctaaaaagactttt
attgggctaccatcaccccttggatatgttgctggtgtcggaagaggagcaactggtttc
accacccgatcagatatcggacctgcaaggcaggcgactgacgtatcggacgagaggcac
gccgcgccgcccaagcggcggaaaaaggatgacgaagacgacgaaaccgatcttaacgag
tccaactacgatgagttcacaggctacggcggctcgctgttcaacaaggacccgtacgac
aaggacgacgaggaggccgacgccatctacgacgccgtcgacgagcgtatggacgagaaa
cgcaaggagtaccgcgaaaagaagctcaaagaggagctggagcggtaccgcgccgagcgg
cccaagatccagcaacagttctccgacctgaagcgagacctggtgcaggtctccaaagac
gactgggacaacctgcccgaggtgggcgacgcgcggaaccgcaagcagcgcgccccgcgc
gccgagaagttcacgccgctgcccgactcggtgctgggccgaagtctgggcggcgagagc
gtgcacagcatcgacgccagcagtggcttagcctcgatcgtgcccggcacggcgtccatg
gcgcccggcatggtgacaccctcgggcgacctcgacctgcgcaagatcggccaggcgcgc
aacacgctcatgaacgtcaaactgaaccaggtgtccgactcggtgtcgggccagacggtg
gttgacccgaagggctacctcaccgacctgcagggcatgattcccaacttctcgtccgac
atcaacgatatcaagaaggcgcgcctgctgatgaagtcggtgcgcgagacgaacccgcag
cacccgcccgcctggatcgcctcggcccgcctcgaggaggtcaccggcaagctgcagaac
gcgcgcaacctcatcatgaagggctgcgaggcctgccccaacgccgaggatgtgtggctg
gaggcagcgcgtctgcagccgcccgacacggccaagggcgtggtggcgcaggccgtccgc
cagctgcccaactcggtccggctctggctgaaggccgccgacctcgagctcgagctcaag
ggcaaacggcgcgtgttccgcaaggcgctcgagctgcagccgaactcggtgcgcctctgg
aaggcggctgtcgagctagaggaggcggaggacgcgcgcattctgctgtcgcgcgccgtc
gagtgctgcccgacagccgtcgagctgtggctggcgctggcgcggctcgagacgtacgag
aacgcgcgcaaggtgctgaacaaggcgcgcgagaacgtgccgacagaccgccagatctgg
ctgtcggccgccaagctcgaggaggccaacgataacgcgccgatggtggtgcgcattgtg
gagcgtgcgatcgcctcgctctcggccaacggcgtcgagatcaaccgcgagttctggctg
aaggacgccgtgcagtgcgagcgcgccggctcggcgctgacgtgccaggccgttatcacg
gccgtcatcggctacggcgtcgaggaagaggaccgcaagagccagtggatggaggacgca
gaggcgtgtgccgcgcaaggcgccgtcgagtgtgcgcgcgccatctacgcgcacgctctg
gccgcgtaccccagcaagaagtccatctggctggcggccgcgtacttcgagaagtcacac
ggcaccagggagagtctggagacgctgctgcagcaggccgttttgcactgccccagagct
gaagtgctctggctgatgggcgccaagtcgaagtggttggcgcgggacgtgccagcggca
cgctccatcctgtcgatggccttccaagccaaccccaactcggaggagatctggctggcc
gctgtcaagctcgagtccgagaacaacgagtacgagcgcgcgcgcaagctgctctccaag
gcgcgctccagcgcccccacgcccaggtcggtcgccgctcgtgctgctgggactgcggtg
tgcctgcctcagcgcggtgcaagcctggagctgatttgtaagagctggttggtgacagca
gcagcttttaatcgcttcttccgtcggacgtgctacagaggttga
DBGET
integrated database retrieval system
