Pollicipes pollicipes (gooseneck barnacle): 119103679
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Entry
119103679 CDS
T08250
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03015
mRNA surveillance pathway
ppoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119103679
09123 Folding, sorting and degradation
03018 RNA degradation
119103679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119103679
03041 Spliceosome [BR:
ppoi03041
]
119103679
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119103679
mRNA cycle factors
Stress granule specific factors
119103679
Spliceosome [BR:
ppoi03041
]
Complex C
Other components
Complex C specific factors
119103679
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
119103679
NCBI-ProteinID:
XP_037083192
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MNSAGPNYPMASLYVGDLHADVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQ
QSADAERALDTMNFDVVKGRPIRIMWSQRDPSLRRSGVGNIFIKSLDKSIDNKAMYDTFS
AFGNIMSCRVATDENGVSKGYGFVHFETEKAATDAIEKVNGMLLNDKKVFVGKFVPRKER
EKELGEKAKRFTNVFVKNFGDELDDEKLLELFQPFGTISSHKVAAGEDGKAKGFGFVSFE
DPEAAEAAVNDMNGKEINGKTIYVGRAQKKAERQHELKRKFEQIKLERMNRYQGVNLYVK
NLDDGIDDERLRREFAQFGTITSARVMMEDGRSRGFGFVCFSSPEEATKAVTEMNGRIVS
SKPLYVALAQRKEDRKAHLASQYMQRMTSMRMPGVNPMFQPSGGGYFVPTMPQATQRFYP
PAQMAHQMRPGPRWQQPGGQMRLGGQAQPGMAAPFRAQAQRQPGQAAAAGAMRGLQAQAR
PMAGQQALMPAGMQPRPMAPQPGAAPQPRPSYKFTPNMRNPMQQLAGGVVAQPPLAPQPL
AQAAVRVQGQEPLTASMLAAAPEQEQKQMLGERLFPMIQHMYPELAGKITGMLLEIDNSE
LVHMLEHHESLKGKVDEAVAVLQAHQAKQPGTAPQPAGKKE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgccgggcctaactatcccatggcgtctttgtacgtcggggatctccatgcc
gatgtcacggaggccatgctgtttgagaagttctcaactgctggccccgttctctccatc
cgagtctgccgagacatgataacccgccgttctttgggttatgcttatgtgaacttccag
caatcagcagatgccgagcgtgctctggacacgatgaacttcgacgtggtgaagggccgg
ccgatccgcatcatgtggtcgcagcgggacccgtcgctgcgccgctccggcgtcggcaac
atcttcatcaaatcactggataagtccatcgacaacaaggccatgtacgacacgttctcg
gccttcggcaacatcatgagctgccgcgtggccaccgacgagaacggcgtgtccaagggc
tacggcttcgtgcacttcgagaccgagaaggcggccacggacgctatcgagaaggtgaac
ggcatgctgctgaatgacaagaaggtgttcgtcggcaagtttgttccgcgcaaggagcgc
gagaaggagctgggagagaaggccaagcgcttcaccaacgtcttcgtcaagaacttcggc
gacgagctcgacgacgagaagctgctggagctgttccagccgttcggcaccatctccagc
cacaaggtggccgccggagaggacggcaaggcgaagggcttcggcttcgtcagcttcgag
gacccggaggcggccgaggcggctgtcaatgacatgaacgggaaggaaatcaacggaaag
accatctacgtcggtcgcgctcagaagaaggccgagcgccagcacgagctgaagcgcaag
ttcgagcagatcaagctggagcgcatgaaccgctaccagggcgtcaacctctacgtcaag
aacctggacgacggcatcgacgacgagcgcctgcgtcgcgagttcgcccagttcggcacc
atcaccagcgccagggtgatgatggaggacggccgcagccgcggcttcggcttcgtctgc
ttctcgtcgcccgaggaggccacaaaggccgtcaccgaaatgaacggccgcatcgtctcc
tccaagccgctgtacgtggcgctggcgcagcgcaaggaggaccgcaaggcgcacctggcc
agccagtacatgcagcgcatgaccagcatgcgcatgccgggcgtgaaccccatgttccag
ccgagcggcggcggctacttcgtgccgaccatgccgcaggcgacgcagcggttctacccg
ccggcgcagatggcgcaccagatgcggccgggaccgcgctggcagcagcccggcggccag
atgcgcctgggcggccaggcgcagccgggcatggcggcgccgttccgggcccaggcgcag
cgccagccgggccaggcggcggccgccggcgccatgcgcggtctgcaggcgcaggcgcgc
cccatggccggccagcaggcgctcatgccggccggcatgcagccgcgtccgatggcgccg
cagccgggtgccgcgccccagccgcgccccagctacaagttcacgccgaacatgcgcaac
ccgatgcagcagctggcgggcggcgtggtggcgcagccgccgctggcgccgcagccgttg
gcgcaggcggccgtgcgggtgcagggccaggagccgctgacggccagcatgctggcggcg
gcgcccgagcaggagcagaagcagatgctgggcgagcggctcttccccatgatccagcac
atgtacccggagctggccggcaagatcaccggcatgctgctggagatcgacaactcagag
ctggtgcacatgctggagcaccacgagtcgctcaagggcaaggtggacgaggcggtggcc
gtgctgcaggcgcaccaggccaagcagccgggcaccgcgccgcagccggccggcaagaag
gagtag
DBGET
integrated database retrieval system
