Pollicipes pollicipes (gooseneck barnacle): 119103689
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Entry
119103689 CDS
T08250
Name
(RefSeq) DDB1- and CUL4-associated factor 13-like
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppoi03009
]
119103689
04121 Ubiquitin system [BR:
ppoi04121
]
119103689
Ribosome biogenesis [BR:
ppoi03009
]
Eukaryotic type
90S particles
Other 90S particles
119103689
Ubiquitin system [BR:
ppoi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119103689
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Sof1
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
eIF2A
Beta-prop_HPS5
Beta-prop_WDR19_1st
PEP5_VPS11_N
VPS11_N
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
PROPPIN
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
119103689
NCBI-ProteinID:
XP_037083202
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MKVKCLVRNPDDYLRETKKDIFKMPRNYDPELHPFTAPREYTRAMNAVKLSRMFAKPFLG
SLDGHRDSVTALSKHPTSLSQLYTGAADGEVRIWDLAQMRCLRTIQAHEGYIRAMTHTID
GSAFFTVGDDKTIKRWRSGAVNEDEEEEPENTVLLRTIVTSISHAVGRPQFATCGETCQI
WEESRNEPLKTFSWGVDSLSCVRFNPVETHMLGACASDRSIILYDTRELQPIRRVTTQLR
SNVIAWNPMEAFVFTAANEDYNLYSWDMRRLRRPLVIHKDHVSAVIDVDYSPTGREFVSG
GYDKTLRIFGAREAHSRDIYHTRRMQRVACVCWSGDDKYVLSGSDEMNVRLWKARASEKL
GVLKERERAARNYNSRLVEKFGSHPQVARIQRHRQVPRQVLTGRKEQRVMRASQKRKEAN
RRAHSRPGTVPYVAEADKFVLREQE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaagtgtctggttcgaaatccagatgattatctgagagaaaccaagaaagat
attttcaagatgcccaggaactacgacccagagctgcacccgttcacggctccgcgcgaa
tacacgcgcgccatgaacgctgttaagctgagccgcatgttcgccaagccatttctgggc
agtctagatggccaccgggacagcgtgacagcactgagcaagcatccgaccagcttgtca
cagctgtacacaggcgccgcggacggagaggtccggatatgggatctggcgcagatgcgg
tgtctgcgcaccatccaggctcacgagggctatatccgcgccatgacgcacacgatcgac
ggcagcgctttttttaccgtcggggacgataagacgatcaagagatggcgttcgggagct
gtcaacgaggacgaagaagaggaaccagaaaacactgtcctgctgaggaccatagtaacg
agcatcagccacgcggtgggcaggccgcagttcgccacgtgtggcgagacatgccagatc
tgggaagagtctcgcaacgagccgctcaagacgttctcctggggcgttgacagcctcagc
tgcgtgcgcttcaacccggtggagacgcacatgctgggtgcctgcgccagcgaccgcagc
attatcctgtacgacacgcgggagctgcagccgatccggcgggtcaccacccagctgcgc
tccaacgtcatcgcatggaaccccatggaggcgttcgtcttcaccgccgccaacgaggac
tacaatctgtactcttgggacatgcgacgccttaggcggccgctcgttatccacaaggac
cacgtatcggccgtcatcgatgttgactactcacccactggccgcgagtttgtctccggc
ggctacgacaagacgctgcgcatcttcggggccagggaggcacactcgcgggatatctac
cacacgcggcgcatgcagcgcgtcgcgtgcgtctgctggagcggcgacgacaagtacgtg
ctgagcggcagcgacgagatgaacgtgcgcctgtggaaggcgcgcgccagcgagaagctg
ggcgtgctgaaggagcgcgagcgtgccgcgcgcaactataacagccggctggtggagaag
ttcggcagccacccgcaggtggcgcgcatccagcgccaccgccaggtgccacggcaggtg
ctcacgggccgcaaggagcagcgcgtgatgcgcgccagccagaagcgcaaggaggccaac
cggcgcgcgcactcgcggccgggcaccgtgccttacgtggccgaggcggacaagtttgtg
ctccgggagcaggagtga
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