Pollicipes pollicipes (gooseneck barnacle): 119103752
Help
Entry
119103752 CDS
T08250
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
KO
K10752
histone-binding protein RBBP4
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03082
ATP-dependent chromatin remodeling
ppoi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119103752
03083 Polycomb repressive complex
119103752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppoi03036
]
119103752
Chromosome and associated proteins [BR:
ppoi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
119103752
Histone modification proteins
HAT complexes
HATB complex
119103752
HDAC complexes
Sin3A-HDAC complex
119103752
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
119103752
PRC2.2
119103752
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
119103752
Heterochromatin formation proteins
Other heterochromatin formation proteins
119103752
Chromatin remodeling factors
NuRD complex
119103752
NuRF complex
119103752
NuRF complex (fruit fly)
119103752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
CAF1C_H4-bd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_IFT122_1st
MIOS_WD40
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
119103752
NCBI-ProteinID:
XP_037083282
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MTHALEWPSLTAQWLPDVTRPDGRDYTIHRLILGTHTSDEQNHLLIASVQLPTEDAQLDP
SHYDSERGEFGGFSSVNGRIDIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYT
KHPSKPDAGGECSPDLRLRGHQKEGYGLSWNPSVNGNLLSASDDHTICLWDINATPKENK
VVDAKNIFTGHTAVVEDVAWHLLHPTFFGSVADDQKLMIWDTRSSTTNKPSHIVDAHTAE
VNCLSFNPYSEYILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS
SGTDRRLHVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSE
DNIMQVWQMAENIYNDEEPEAQPAELEANRD
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacgcgctggaatggccctcgctgacggcccagtggctgccggatgtgaccagg
ccggacgggcgggactacaccatccaccggctgatcctgggtacgcacacgtccgacgag
cagaaccacctgctgatcgcgtccgtgcagctgccgaccgaggacgcccagctcgacccg
tcccactacgacagcgaacggggcgagttcggcggcttcagctcagtgaacggccggatc
gacatcgagatcaagatcaaccacgagggcgaggtgaaccgggcgcgctacatgccgcag
aacccgtgcgtcatcgccaccaagacgcccagctcggacgtgctcgtgttcgactacacc
aagcacccgagcaagccggacgccggcggcgagtgcagccccgacctcaggttgcggggc
caccagaaggaggggtacggcctctcctggaacccgtctgtcaacggcaacctgctgtcg
gcctcggacgaccacaccatctgcctctgggacatcaacgctactcccaaggagaacaag
gtggtggacgccaagaacatcttcaccggacacacggccgtggtggaggacgtggcgtgg
cacctgctgcacccgacgttcttcggctctgtggccgacgaccagaagctgatgatctgg
gacacgcgctccagcaccaccaacaagccgtcgcacatcgtcgacgcgcacacggccgag
gtcaactgcctctcgttcaacccttactcggagtacatcctggcgacgggctcggccgac
aagacggtggcgctgtgggacctacgcaacctcaagctcaagctgcactcgttcgagtcg
cacaaggacgagatcttccaggtgcagtggtcgccgcacaacgagacgatcctggcgagc
agcggcaccgaccggcgcctgcacgtctgggacctaagcaagatcggcgaggagcagtcg
gccgaggacgctgaggacgggccgccggagctgctcttcatccacggcggccacacggcc
aagatctccgacttctcgtggaaccccaacgagccgtgggtggtgtgctccgtctccgag
gacaatatcatgcaggtgtggcagatggccgagaacatctacaatgacgaggagcccgag
gcgcaaccggccgaactcgaggccaaccgcgactga
DBGET
integrated database retrieval system
