Pollicipes pollicipes (gooseneck barnacle): 119104669
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Entry
119104669 CDS
T08250
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03013
Nucleocytoplasmic transport
ppoi03015
mRNA surveillance pathway
ppoi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119104669
09122 Translation
03013 Nucleocytoplasmic transport
119104669
03015 mRNA surveillance pathway
119104669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119104669
03041 Spliceosome [BR:
ppoi03041
]
119104669
03009 Ribosome biogenesis [BR:
ppoi03009
]
119104669
03012 Translation factors [BR:
ppoi03012
]
119104669
Enzymes [BR:
ppoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119104669
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119104669
mRNA cycle factors
Stress granule specific factors
119104669
Spliceosome [BR:
ppoi03041
]
Complex C
Other components
EJC/TREX
119104669
Ribosome biogenesis [BR:
ppoi03009
]
Eukaryotic type
90S particles
Helicases
119104669
Translation factors [BR:
ppoi03012
]
Eukaryotic type
Initiation factors
eIF-4
119104669
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
UvrD-helicase
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
119104669
NCBI-ProteinID:
XP_037084287
LinkDB
All DBs
Position
Unknown
AA seq
404 aa
AA seq
DB search
MAAERVGRRNQDLEDLSNVEFETSEDVEVVPTFDNMNLREDLLRGIYAYGFERPSAIQQR
AIRPIQKGRDVIAQAQSGTGKTATFSISVLQSLDTTLRETQVLIMSPTRELAVQIQKVIL
ALGDYMNVQCHACIGGTSLGEDIRKLDYGQHIVSGTPGRVFDMIRRRTLRTRAIKMLVLD
ESDEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELT
LEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVTSM
HGDMPQKEREAIMKEFRAGHSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGR
SGRFGRKGVAINFVKADDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggagcgagtagggcgaaggaatcaagacctggaagacctatccaacgtcgaa
ttcgaaaccagtgaagatgtggaagttgtacctacgtttgataatatgaacctccgtgag
gatcttctccgtgggatctacgcatatggcttcgaacggccctcggcgatccagcagcgc
gccatccgccccatccagaagggccgcgacgtgatcgcgcaggcgcagtcgggcaccggc
aagacggccaccttctccatctcggtgctgcagagcctggacaccacgctgcgggagacg
caggtgctcatcatgtcgcccacccgtgagctggccgtccagatccagaaggtgatcctg
gcgctgggcgactacatgaacgtgcagtgccacgcctgcatcggcggcaccagcctgggc
gaggacatccgcaagctcgactacggccagcacatcgtctcgggcacgcccggccgcgtg
ttcgatatgattcgtcgccggacgctacgcacccgcgccatcaagatgctcgtgctggac
gagtcggacgagatgctgaacaagggcttcaaggagcagatctacgacgtgtaccgttac
ctgcctccggccacccaggtggtgctgctgtcggccacgctgccgcatgagatcctggag
atgaccagcaagttcatgacggaccccatccggatcctggtgaagcgtgacgagttgacg
ctggagggcatcaagcagttcttcgtggccgtcgagcgcgaggagtggaagttcgacacc
ctctgcgacctgtacgacacactgaccatcacccaggccgtcatcttctgcaacacgaag
cggaaggtggactggctgacggagaagatgcgggaggccaacttcaccgtcacctccatg
cacggcgacatgccgcagaaggagcgcgaggccatcatgaaggagttccgggcaggtcac
agccgagtgctgatcaccacggacgtctgggcgcgcggcatcgacgtgcagcaggtgtcg
ctcgtcatcaactacgacctgcccaacaaccgcgagctttacatccaccggatcggccgc
tcgggacgcttcggccgcaagggtgtggccatcaacttcgtcaaggcggacgacattcgc
atcctgcgcgacatcgagcagtattactcgacgcagatcgacgagatgcccatgaacgtg
gccgacttgatctag
DBGET
integrated database retrieval system
