Pollicipes pollicipes (gooseneck barnacle): 119105522
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Entry
119105522 CDS
T08250
Name
(RefSeq) nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03013
Nucleocytoplasmic transport
ppoi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119105522
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119105522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119105522
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119105522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Nup153
Motif
Other DBs
NCBI-GeneID:
119105522
NCBI-ProteinID:
XP_037084880
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MTSQGGGKARDKLSHRNKPYERRRSLLGRLTGTVSRLLPEAWVPAWLQEEEQQQELEARP
PPPELRPGPSSAATRRNHLNAAAPPWSQVPPPVSGIQPGEDEDGRLMADTGGGGGGSALV
SHAVWSRTATPGRPQPAALSSKRPRFRPAALSASLSQDDAANSSLNRSGAAVSPFYPGPT
VYGGAANHRRLRVPPPTSVGPYQVRPRAVPVRAADGDDELTMSTTARRILSVLEGMSTPV
TDARRAPPAAGPQLLDASFGSQRRAGLYGAHGARLGRPRPDNPPVHRVVSPARVTVEPNR
RRPSPGAVPAAAQHATEDAAARRVTFSSQPTPVAAPAQGGKMRRQKESRHYSSRPGADPG
ELPPSPVALPDVSLPFTSLRPFSLSTSTPKPPPAEPAKRPAAAAAAAVSTDFIFSSPRPV
CPPGAGLVNGLADGADDLTFAFSVPAALDAPGQVLTPTATPTLAGAGSWGDKFRAAPGAW
ECAVCMLQNKAGADRCIACQAARTGGAGTTTDPPAATAAPSPPAAAAASSWGDKFKPAAG
AWTCDVCMITNKPDATKCVACQTPNAAAAKPSVASAPAPETSSAAPAASWGDKFKPVPGE
WTCDTCMLKNNPDSANCVACETPNSKAALSSSAAAPAPAATTITPASSWGDKFKPVAGEW
TCDTCMVTNKPDSSKCVACQTPNPKAASANASPAAASKPAQETWECTTCLVRNKPAVSKC
AACDSPRPEARAQNSEPYQFKSAQPPAAGAFVFGFGDSQKAPTTKSTPSSESDGFRFGVT
PPAAPASAGFSFGFGAPASTGGQESAEDAAPAARPTPAVNFNAGSPGSPRPLKRRSAAAD
RPADKAAPELNTGSIMDVLGKSSPGVGGDKAPTPSTVAAEEPKINKVPSVSPANGVFSFG
ATSAAKDSGAATTFAFGAGSQGSSGGSAPTPGFSFGSGTSSADKSSSGAPPASDKSAPAF
MFGAKASETAEKPSGGFSFGAKTSVASDNVAEGSPFGAKTAAGADKSAAGFSFGAKPAET
CANVADGVPGGMKPSASVDQNSGGFVLGAKVSDSSVKHTDIFSASANPSATVEKPTGSFS
FGAKAPEGSEKPPGLLSFGDASGKSGNPAATFSFGSSSTPAAKPAKGFSFGGGTTAASTA
AAPSGGFAFSTAAAGAASSAGFPAAPPSVPAGGFAFGAATTNKTESSALFTFGATSVNGP
SAKKAATADGAPASAVFQFGSGPAAAGTAAATGDGRQ
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccagggcggaggaaaggcgcgggacaagctgtctcatcggaacaagccatac
gaacgccgacggagtctgcttgggcgcctgacgggtacggtgagccgtctgctgcccgag
gcctgggtgccagcctggctgcaggaggaggagcagcagcaggagctggaggcgcggccg
ccgccgcccgagctgcggcccggtccctctagcgcggccacgcgacggaaccacctgaac
gcggccgcgccgccgtggtcacaggtgccgccaccagtgagcggcatccagccgggtgag
gacgaagacggacgcctgatggcggacaccggcggcggcggcggcggctcggcgctcgtc
tcgcatgcggtctggtcccgcacggccacccccggccggccgcagccggcagcgctcagc
agcaagcggccccgcttccgaccggccgcgctcagcgcctccctgtcgcaggacgacgcg
gccaactcgtcgctgaaccggagtggcgcggccgtctcgccgttctacccaggcccgacg
gtgtacggcggtgcggccaaccatcggcggctgcgcgtgccgccgcccacctcagtcggc
ccctaccaggtgcgtccacgcgccgtgcccgtgcgcgccgccgatggcgacgacgagctg
accatgtcgacgacggcgcggcgcatcctgtccgtgctggagggcatgtcgacgccggtg
acggacgcccgccgcgcgccgccggcggccggcccccagctgctggacgccagcttcggc
agccagcgacgcgccggcctgtacggggcgcacggcgccaggctgggccgaccccgtccg
gacaacccgcccgtgcaccgggtggtgtcgccggcccgtgtgacggtggagccgaaccgg
cggcgcccgtcgcccggcgccgtcccggccgccgcgcagcacgccacggaggacgcggcc
gccagacgggtgacgttctctagtcagccgacgccggtggcggcgcccgcgcagggcggc
aagatgcgacgtcagaaggagtcgcgccattactcgtcgcgtccgggtgccgacccgggc
gagctgccgccgtcgccggtggcgctgcccgacgtcagcttacctttcactagcctgcgg
cccttcagcctgtccacgtccacgcccaaaccgccgccggccgagcccgctaaacggccg
gccgctgccgccgccgccgccgtctccaccgacttcatcttcagcagtccgcggccggtg
tgcccgcccggcgccggcctcgtgaacggcctggccgacggcgccgacgacctgacgttc
gcgttcagcgtgccggcagccttggacgcgccggggcaggtgctgaccccgaccgccacc
ccgaccctggccggcgccggctcctggggcgacaagttccgcgccgcgcccggcgcctgg
gagtgcgccgtatgcatgctccagaacaaggccggcgccgaccgatgtatcgcctgtcag
gcggccaggaccggcggtgccggtaccacgacggacccgcccgccgccaccgccgcgccg
agtccgcccgccgccgccgccgccagctcttggggtgacaagttcaagccggccgccggc
gcgtggacctgtgatgtctgtatgatcaccaacaagccggacgcgaccaagtgcgtggcg
tgtcagacgccaaacgcagcggctgccaagccgagtgtagccagcgcgccggcgcccgag
acgtcctcggcggcgccggcggcctcttggggcgacaagttcaagcccgtccccggcgaa
tggacgtgcgacacgtgcatgctgaaaaataacccggactcggccaactgtgtcgcctgc
gaaactccgaactccaaggccgctctgtccagttcagccgcggccccagcaccggcggcg
acgaccatcacgccggcgtcgtcttggggcgacaagttcaaaccggtcgccggcgagtgg
acgtgcgacacatgcatggtgacgaacaagccggactcctcgaagtgcgtcgcgtgccag
acgccgaaccctaaggcggcgtcggccaacgcgagccccgccgccgcgtccaagccagcg
caggagacgtgggaatgcacgacatgtctggtgcgcaacaagccagccgtctcgaagtgc
gcggcctgcgactctccccggccggaggcccgcgcccagaacagcgaaccgtatcagttc
aagtcggcgcaaccaccggccgccggcgccttcgtgttcggattcggcgacagccagaag
gcgccgacgaccaaatcgacgccctcgtcggaaagcgacggcttcaggttcggggtgacc
ccgcctgccgcgcctgcctctgccggcttctcgttcgggttcggcgcgccggccagcacc
ggcggccaggagagcgccgaggacgcggccccggcagcccggccgacacccgccgtcaac
ttcaacgccggctctccgggctcgccccggcccctcaagcgcaggtcggcggccgcggac
aggccggccgataaggcggcgcccgaactgaataccggcagcatcatggacgtgctgggc
aagagctccccgggtgtgggcggggacaaggcgccaacgccgagcaccgtcgccgcggag
gaacccaagatcaacaaagtgccgtcggtgtcgccggcgaacggcgtgttcagttttggc
gcgacctcagccgccaaggattctggcgcggcgacgacgttcgcattcggcgctggatcg
caggggagtagcggcggctccgcgccgacgccgggtttcagcttcggcagcggcacgtcg
tcggccgataagtcatcgtcgggggcgccgccggcgtctgacaagagtgcgccggcattc
atgttcggtgcgaaagcgtcggaaaccgccgagaagccgtcgggtgggttctcgttcgga
gcgaagacgtctgtggcgtcggacaatgtcgcggaaggatcgccattcggtgcgaagacg
gctgcaggagcagacaagtcagccgcgggattctctttcggtgctaaacccgctgagacc
tgcgccaatgtcgctgatggggtgcccggcggtatgaagccgtcagcaagcgtagaccaa
aattccggagggtttgtgttgggagcaaaagtgtctgatagctcagttaaacacaccgac
atcttttctgcgagcgcgaacccttccgcgaccgttgaaaagcctactggatcattttcg
ttcggagcgaaggcccctgaaggctcggaaaaaccccctggtctgttgtcgttcggcgac
gcgtcgggaaaatcaggcaacccggcggcgacgttctccttcggcagttcttccacaccg
gccgcgaagccggccaaaggtttctccttcggcggcggcacaacggcggcgagcacagct
gctgcgccctccggcggcttcgcgttcagcaccgcggccgccggcgccgccagctccgcg
ggattcccggcggcgccgccgtctgtgccagccggcggcttcgcgttcggcgcggcgacc
actaacaagacagagtcgagcgctctgttcacgttcggtgccaccagcgtgaacgggccc
tcggctaagaaggcggccactgcagacggcgcgccggcgtcggccgtgtttcagttcggc
tccggcccggccgccgccggcaccgccgccgccaccggcgacggccgccaataa
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