Pollicipes pollicipes (gooseneck barnacle): 119105648
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Entry
119105648 CDS
T08250
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase-like
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppoi03009
]
119105648
Enzymes [BR:
ppoi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
119105648
Ribosome biogenesis [BR:
ppoi03009
]
Eukaryotic type
Other ribosome biogenesis factors
119105648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_fdxn-like
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
119105648
NCBI-ProteinID:
XP_037085003
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MDVPAETAEQSKYQHSVKLPYLYKEGAKILKAYSEKKGSLKTLVYATRQQRLYRRLLALV
SRAVEHAPAVEGGAGGFCRRSGSCTRPSSDGTTRTNVLLNLFVYSVAMFTLAVRGVLRRR
ARGRGSLGYAEHGYLWGTAAAVLTVHALIAMFVWGGVQGAPRYARVNTLLASLDDVTRQL
TAEGWERVEYPADVRYEEFIALVKALGPSQFLLDLHVPALLVFAAAGCLILQDKASCLPP
LALAPSPGEQVLDACAAPGMKTSQLAGHDAEHRDAGAVERDQARFQTLSRMLRRAGVTNC
RLICGDFLRLQPADHPQLTAILLDPSCSGTGMAGRESADSVSADRLQRLANLQGMLLRHA
LSFPAVRRVVYSTCSVTERENEQVVAATLAAHAEHDLCNGFFVATFVRAAENEARPGKHK
VKTRKRATMRRGDGSGDSGDHNRKTCWREDRQDCGIG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgccagctgaaacagcagaacaatcgaaataccagcactctgtcaagctccca
tatctgtacaaagaaggggcgaagatcctcaaagcgtattcagaaaagaaggggagcctg
aagactctggtgtacgccacacgtcaacagcgactgtaccggcgcctgctggcactcgtg
tcgcgcgccgtcgagcacgcgccggccgtggagggcggcgctggcggcttctgccggagg
agcggttcatgcactcgtccatcgagcgacggcacgacgcgcaccaacgtgctgctcaac
ctgttcgtttacagcgtggccatgttcacgctggccgttcgtggcgttctacggcgccgt
gcacgtggccgaggatcgctgggttacgccgagcacggctacctgtggggcacggcggcg
gcagtgctcaccgtgcacgcgctcatcgccatgttcgtgtggggcggcgtacaaggagcg
ccccggtacgcgcgggtcaacacgctcctcgcttccctggatgacgtcacgcgccagctg
acggcggagggctgggagcgggtcgagtacccggccgacgtccgctacgaggagttcata
gctcttgtcaaggcgctgggaccgtctcagttcctgctggacctgcacgtgcccgccctg
ctggtgttcgccgctgcgggctgtctcattctgcaggacaaggccagctgcctgccgccg
ctggcgctggcgccctcccccggcgagcaggtcctggacgcgtgcgccgcgcccggcatg
aagacgtctcagctggcgggccatgatgcagaacacagggacgctggtgctgtggagcgg
gaccaggcccggttccagacgctgtcccggatgctgcgccgagccggcgtcaccaactgc
cggctcatctgcggcgacttcctccgcctgcagccggccgaccaccctcagctgacagcc
atactgctggacccatcctgctccggcacaggtatggcaggccgtgagtcggcggactcg
gtgtcggcggaccgtctccaacggctggcaaatcttcagggcatgctgctgcgccacgcc
ctcagctttccggccgtccgacgagtagtttactccacctgcagcgtcaccgagcgcgag
aacgaacaggtggtggcggccacgctggcggctcacgccgagcacgacctctgcaacggc
ttcttcgtggcgacgttcgtcagggctgccgaaaacgaggctcggccgggcaagcacaag
gtcaagaccaggaagcgggcaaccatgcgacgcggagacggctcgggcgacagcggagac
cacaaccggaaaacgtgctggcgggaagaccgccaagactgtgggatcggctga
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integrated database retrieval system
