Pollicipes pollicipes (gooseneck barnacle): 119105901
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Entry
119105901 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119105901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119105901
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
119105901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
119105901
NCBI-ProteinID:
XP_037085360
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MSRHRNVRGMNYDDEYDGYYDVYGHSVDDEYTMSPSSVEREFTFDRSRQHNMDAFLLHDT
TIAEEGEESAGHPAAGRQDSTGPLIPEQLGDEQRARLLSCLDAVRDVVGETVSDHTIVRA
VLQHDYSCARALDAILAGAVAGMPGSGSSRLSRRDSLESPPTARAVAEARPSCTEPSPDT
AATASAMFRPVKAAEVNCRPAPAARVIIGFQEQPAGSEKETPPAAASAPALPAEVRELRG
AASRSGSSSPLSSRRQSPAQSAGADTASPRTPASTRDAQAEYDKERAGGKQLINMVVIGH
VDAGKSTLMGHLLCQLGCVNKKAMHKYETESKKMGKQSFKFAWVLDETGEERARGITMDV
AHFKFETPQKTVTLLDAPGHKDFIPNMITGAAAADVAVLVVNATNGEFETGFESGGQTRE
HAILVRSLGVSQLAIAVNKLDTVDWSQARFDDIRTRLGAFLRSVGFRESELRYVPCSGLT
GENLTQPAQEPQLQAWYSGPTLLQVIDGFPAPKRAVSMPLRLFVSDVFKGQQQSGLSMAG
RIDSGMMQLGDRVLVMPHGDTATVKGLAIDEMPVQSAFAGDHVTVTLSSVDAQSQTVGVV
LCDPARPVRVATSVQARIVIFSIDLPITKGYQVVVHYQSLSEPATVSRLLCQLHRSTGEV
LKRRPRCLPGNTSADVVITFQRPVCVELYKDFREYGRLMLRVAGHTVAAGLVTEVK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacaccgcaatgtgcgtggaatgaactacgacgatgaatacgacggctactat
gacgtgtacggccacagcgtggacgacgagtacaccatgtcgccgtcgtccgtagagcgc
gagttcacgttcgaccgcagccgacagcacaacatggacgctttcctgctgcacgacacc
accatcgccgaggaaggcgaggagagcgccggccacccggcggccggccgccaagactcg
accggccccctgatccccgagcagttgggggacgagcagcgcgcgcgcctcctctcctgt
ctggacgccgtgcgggacgtggtgggcgagacggtctcggatcacaccatcgtgcgggcc
gtgctgcagcacgactacagctgcgcccgcgcgctggacgccatcctggccggcgccgta
gccggcatgcccggatcaggctcgtcccggctctccaggcgcgattctctggaaagtccg
ccgacggctcgtgccgtggccgaggcccggccaagctgcaccgagccgagcccagacacc
gccgccaccgcatcagcgatgttccggccagtgaaggcagctgaggtcaactgtcggccc
gcccccgccgcccgtgtcatcattggcttccaggagcagccggctgggtcagagaaggag
acgccgccagccgccgcgtcggcgccggcgctcccggcggaagtgcgtgagctgcgcggc
gccgccagccgctccggctccagctcgcctctctcgtcccgccgccagtcgcccgcgcag
tcggccggcgccgataccgcctcgccgcgcacccccgcctcgactcgggacgcccaggcc
gagtacgacaaggagcgggcgggcggcaaacagctgatcaacatggtggtcatcggtcac
gtggacgccggcaaatctactttgatgggccatctgctctgtcaactgggctgtgttaat
aagaaggccatgcataaatatgaaaccgagagcaagaagatgggcaagcagtctttcaag
ttcgcctgggtgctagacgaaactggcgaagagagagcacgcggcatcaccatggatgtg
gcccacttcaagttcgagacgccgcagaagacggtgacgctgctggacgcgcccggccac
aaggactttattccgaacatgatcacaggggccgccgccgccgacgtagccgtgctggtg
gtgaacgccaccaacggcgagtttgagacgggcttcgaatcgggcggccagacccgcgag
cacgccatcctggtccgctcgctgggggtcagtcagctggcgatcgccgtcaacaagctg
gacacggtcgactggtctcaggcgcgctttgacgacattcggacgcggctgggcgccttt
ttgcgctcggtcggcttccgcgagtccgagctgcgctacgtgccctgctccggcctgacc
ggcgagaacctgacgcagccggcgcaggagccgcagctgcaggcctggtacagcggcccc
accctgctgcaggtgatagacggcttcccagcgccgaagcgggccgtctccatgccgctg
cgcctgttcgtctcggacgtgttcaagggccagcagcagtcgggcctgagcatggctggc
cgcatcgactccggcatgatgcagctgggggaccgcgtgctggtcatgccgcacggcgac
acggccactgtcaaggggctggcaatcgacgagatgcctgtgcagtcggcgttcgccggc
gaccacgtgactgtgacgctgtccagcgtcgacgcccaaagccaaacagtgggcgtggtg
ctctgtgacccggcccggccggtgcgcgtggccaccagcgtgcaggcacgcatcgtcatc
ttcagtatcgatctgccaatcaccaagggctaccaggtggtggtacactaccagtcgctg
agcgagccggctaccgtgtcccggctactctgtcagctgcaccgctccaccggggaggtg
ctgaagcggcggccgcgctgcctgccgggtaacaccagcgccgacgtcgtcatcaccttc
cagcggcccgtctgtgtagagctctacaaggatttccgggagtatggccgactcatgctg
cgggtggccgggcacacggtggcagctggactcgtcaccgaggttaagtga
DBGET
integrated database retrieval system
