KEGG   Pollicipes pollicipes (gooseneck barnacle): 119106220
Entry
119106220         CDS       T08250                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ppoi  Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ppoi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    119106220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppoi03021]
    119106220
   03036 Chromosome and associated proteins [BR:ppoi03036]
    119106220
Transcription machinery [BR:ppoi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     119106220
   Coactivators
    SAGA/TFTC/STAGA complex
     119106220
Chromosome and associated proteins [BR:ppoi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     119106220
    STAGA complex
     119106220
    TFTC complex
     119106220
    SAGA complex
     119106220
    SLIK complex
     119106220
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd TFIID_NTD2 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR55 WD40_MABP1-WDR62_1st Beta-prop_WDR36-Utp21_1st Beta-prop_IFT122_1st Beta-prop_WDR75_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_Aladin ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_WDR41 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_WDR19_1st WD40_like PEP5_VPS11_N Tricorn_2nd Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160 Cytochrom_D1 Beta-prop_NWD2_C WD_LRWD1 Beta-prop_ACSF4 LisH_TPL
Other DBs
NCBI-GeneID: 119106220
NCBI-ProteinID: XP_037085716
LinkDB
Position
Unknown
AA seq 659 aa
MDQIPSAQEPKGLDKNTLVAVLQFLNKNSLQGAEDALRKETGFFESVGGGTSGGPGPGDV
SNVLSVYKSEGDPEAYTSNYVNLKLFVEKALDIYKYELGQLLFPVFVHMYLELVYNNHPA
EAASFMTAFGGEQEDFFQADVQRLSHVTRREHMQENELIQHFRSNQYTVRMCRDSYVMLK
RHLTEKQHSLLTGLVQDHLLMDVFEGVPRGRQLIQHTAGALEGDPGRQVNKSKMLYGLLK
EPDIQLTVPAEEDDEAEGDDKPKKKKAKKDALVSKKSKNDPNAPSNNRIPLPDLRDIDKR
EKGKGLREGTRRVNLGPDNLPSICFYTFLNAADNVSCVTLCEDSSMMAVGFSSSTVRVWS
LIPQKLRAMKSADDLADIDKDADDVLVRMMDDRSAEQSRTLAGHSGPVHGVSFSPDRTLL
LTCSEDGTIRLWSLQTWTCLVCYKGHIFPVWDVRFSPHGHYFCSGGHDRTVRLWATDHHQ
PLRVMAGHYADVDCVEFHPNSNYVASGSSDRSVRVWDVSNGSCVRVLTGHKDTVYALAFS
PDGRFLVSSGADSAVLCWDLASGQLLSALAQHTDTVYSLQFSRDGAVLASGGMDDCIKLW
DFQKTTEDVLSEDLNVAQAGEVKTSSDLLLTSFATKHTPVLVLHFTRRNLLLAAGPYQS
NT seq 1980 nt   +upstreamnt  +downstreamnt
atggatcagataccatcagcccaagagcctaagggacttgataaaaacaccctggtggca
gttctccaatttctgaacaaaaatagtttgcagggtgcagaggatgccctgaggaaggag
accggcttcttcgagagcgtgggcggcggcacgagcggcggccccggtcctggtgacgtc
agcaatgttctctccgtctacaagagcgagggtgacccggaggcatacacgagcaactac
gtcaacctcaagctgttcgtcgagaaggcgctcgacatctacaagtacgagctgggccag
ctgctgttcccggtgttcgtgcacatgtacctggagctggtgtacaacaaccacccggcc
gaggcggccagcttcatgacggccttcggcggcgagcaggaggacttcttccaggcggac
gtgcagcgcctcagccacgtcacgcgccgcgagcacatgcaggagaacgagctgatccag
cacttccgctccaaccagtacacggtgcggatgtgccgcgacagctacgtgatgctgaag
cggcacctgacggagaagcaacacagcctgctgacgggcctggtgcaggaccacctgctg
atggacgtgttcgagggcgtgccgcgcggccgccagctgatccagcacacggccggcgcg
ctcgaaggcgaccccggcagacaggtgaacaagtcgaagatgctgtacggcctgctgaag
gagcccgacatccagctgacggtgccggccgaggaggacgacgaggccgagggcgacgac
aagcccaagaagaagaaggccaagaaggacgcgctggtctccaagaagagcaagaacgac
ccgaacgcgccaagcaacaaccgcattccactgccggacctacgtgacatcgacaagcga
gagaagggcaagggactgcgcgagggcacgcgtcgggtgaacctgggaccggacaacctg
ccctcaatctgcttctacaccttcctcaacgccgccgacaacgtcagctgtgtgacgctg
tgcgaggacagcagcatgatggcggtgggcttcagcagcagcaccgtccgcgtgtggagc
ctgatcccgcagaagctacgcgccatgaagtcggcagacgacctggccgacatcgacaag
gacgccgacgacgtgctggtgcggatgatggacgacaggtcggccgagcagagccgcacg
ctggccggccactcgggccccgtgcacggggtcagcttctcgcccgaccgcaccctgctg
ctcacctgctccgaggacggcaccattcgtctgtggtcgctgcagacctggacgtgtctg
gtgtgctacaagggacacatcttccccgtgtgggatgtgcggttctcgccgcacggccac
tacttctgctctggcggccacgaccgcaccgtccgactctgggccaccgaccaccaccag
ccactgcgcgtcatggccggacactacgcggatgtggactgtgtggagttccatcccaac
tccaactacgtggcgtccggcagcagcgaccgctccgtccgtgtgtgggacgtcagcaac
ggctcgtgcgtgcgcgtgctcaccggtcacaaggacacggtgtacgcgctggcgttctcg
ccggacggccggttcctggtgtcgagcggggcggacagcgcggtgctgtgctgggacctg
gccagcggccagctgctgagcgcgctggcccagcacaccgacaccgtctacagcctgcag
ttcagccgggacggcgccgtgctggcttcaggtggcatggacgactgcatcaagctatgg
gacttccagaaaaccaccgaggacgtgctgtccgaggatctgaacgtcgcccaggcaggc
gaagttaaaactagttctgatctcctgctgacttcgttcgccactaagcacacaccggtg
ttggtcctgcatttcacgcgacggaatctgctgctcgccgctggcccataccagtcatga

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