Pollicipes pollicipes (gooseneck barnacle): 119106781
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Entry
119106781 CDS
T08250
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B-like
KO
K12821
pre-mRNA-processing factor 40
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119106781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppoi03041
]
119106781
Spliceosome [BR:
ppoi03041
]
Complex A
U1 snRNP components
U1 related factors
119106781
Complex B
119106781
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
Spherulin4
WW_2
GIDA_C_1st
Motif
Other DBs
NCBI-GeneID:
119106781
NCBI-ProteinID:
XP_037086064
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MAGPPPPGGFPLPSGIPLPPFCMPPPGMPPPSFAAFSRPPPAFPPGGAPAAPSPGTPPAG
PPAGAAAAVPARSDAPKTAWTEHRAPDGRTYYYNTATKQSAWDKPDEMKSSTELLLSQCS
WKEYTSDSGKTYYHHVVSKESRWTIPPELEQLKARLASQDAKPPAEAPAAGGDAKKSALD
LAMAATLAAMDIPTPPVTEAAADSPADGGSRSTSGTPEPRRVFKDKREAIEAFKELLREK
GVPSTATWEQALKLIQGDQRYETLQRLNEKKQAFNAYKTQRGKEEKEEQRLRAKKAKEDL
EEFLLTGDRITSMTKYYKCEEMFVDMDIWKAVADHERRDIYEDVVFTLAKREKEETKQMR
KRNMKVLSEILDSMADITHLTTWQEAQQMLLDNPRFAEDTDLLGMDKEDALIVYEDHVRQ
LEADEQEEREADKKRKARLERKNRDAFAALLDELHDQGKLTSMSLWVELYPVLSSDLRFS
AMLGQTGSTPLDLFKFYVEDLKSRFHDEKKIIKEILKEKDFEVQVTTTFEEFATVVCEDK
RSGTLDAGNVKLTYNSLLEKAEAREKEKIKEENRKLKKLESAFKSMLKASDIEHGATWAD
SRAKLENEPAFNAVELESERVRMFKDYQQTLEDACGHHHSKSKKKKSKKKRSRSRSRSDS
GSERRARRSRRKRRSRSRSGSRSRSASSSDAGRRHGKRKTRRRRHSRSSSGSGSESESGR
PERRREKRAARDGPEEGELSEDELEKKRRHLLAQLQEE
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtccaccgccgccgggcggcttcccgcttccgtcgggcatcccgctgccaccg
ttctgcatgccaccgcctggcatgcctccgccgagcttcgcggccttcagccgtccgccg
cctgccttcccgccaggcggcgcgccggccgcgccctctcccggcacgccgccggcgggg
cctcccgccggcgccgccgccgccgtcccggcgcgcagcgacgcgcccaagacggcgtgg
accgagcatcgggcgcccgacggccgcacctactactacaacacagccaccaagcagagt
gcgtgggacaagccggacgagatgaagtcgtcgactgagctgctgctttcgcagtgctcc
tggaaggagtacacctccgacagcggcaagacctactaccatcacgtggtcagcaaggag
tcgcgctggacgatcccgcccgagctggagcagctgaaggcccgcctggcgagccaggac
gcaaagccgccggccgaggcccccgccgctggcggcgacgccaaaaagtcggctctggac
ctggccatggcggccacgctggccgccatggacatcccaacgccgccggtgaccgaggcg
gcggccgactcgccggccgacggcggctcgcgcagcacgagcggcacgcccgagccgcgc
cgcgtcttcaaggacaagcgcgaggcgattgaagcgttcaaagagctgctgcgcgagaag
ggcgtgccaagcaccgccacctgggagcaggcgctgaaactgatccagggcgatcagcgt
tacgagacgctgcagcggctcaatgagaaaaagcaggcgttcaacgcgtacaagacgcag
cgcggcaaagaagaaaaggaggagcagcggttgcgtgccaaaaaagccaaggaggacctg
gaggagttcctgctaactggggaccgcattacctccatgactaagtactacaagtgcgag
gagatgttcgtcgatatggacatctggaaggcggtggcagaccacgagcgccgcgatatc
tatgaggatgtcgtcttcacgcttgccaagcgagagaaggaggagaccaagcagatgcga
aagcggaatatgaaggtgctttctgagatcctggactcgatggcggacatcacccacctc
acgacgtggcaggaggcgcagcagatgctgctcgacaacccgcgcttcgccgaggacacg
gacttgttgggcatggacaaggaagacgcgctgattgtctacgaggaccatgtgcgtcag
cttgaggcggatgagcaggaggaacgcgaggccgataagaagcgcaaggcgcggctcgag
cggaaaaaccgtgacgcgttcgcggccctgctagacgagctgcacgaccaaggcaagcta
acgtccatgtcgctctgggttgagctctacccggtgctgagctcagacctacgcttctcg
gccatgcttggccagacgggctcgacaccgctcgacctcttcaagttttacgtggaggac
ctgaagtcgcgcttccacgacgagaagaagatcatcaaggagatccttaaggagaaagac
ttcgaagtgcaggtgacaacaacattcgaggaattcgcgacagttgtgtgcgaggacaaa
cggtcaggcaccttggacgccggcaacgtcaagctcacctataactcactgctggagaag
gccgaagcgcgcgagaaggagaagatcaaggaggagaatcgcaagctgaagaagctggag
tcggcctttaagagcatgctgaaggcgagtgacatcgaacacggcgccacgtgggccgac
tcgcgcgccaagctggagaacgaacccgccttcaacgccgtcgagctggagtcggagcgc
gtccgcatgttcaaggactatcagcagacgctggaggacgcctgcggccaccatcactcg
aagtctaagaagaagaagagcaagaagaagcggtctcgctcccgctcgcggtccgattcg
ggctcggagcggcgcgcgcggcgcagccggcgcaagcggcgttcgcgctcacgctccggc
tctcgctcgcgaagcgccagctccagtgacgccggccggcgccacggcaagcgcaagacg
cgtcggcggcgccacagtcgctcgagcagcggcagcggctccgagtcggagtcgggccgg
cctgagcggcgccgcgagaagcgcgccgcccgcgacggcccggaggagggcgagttgagc
gaggacgaactggagaagaagcgccgccacttgctggcccagctgcaggaggagtga
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