Pollicipes pollicipes (gooseneck barnacle): 119107298
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Entry
119107298 CDS
T08250
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3-like
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119107298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119107298
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119107298
mRNA degradation factors
3'-5' decay
Pan complex
119107298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
Motif
Other DBs
NCBI-GeneID:
119107298
NCBI-ProteinID:
XP_037086618
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MTSPPTVTPPYTAYVATPPRVADAKSAAAAATHPASFFVSDELRELILRQQNLLLMHPNP
QAYPDLPNEVDNYHELCPLEAPGQPHKSTAFGYITTCYKATNMKSGQCYCLRRIHGLRLA
GTKCLQLVALWSKLQHAGLVTLRELFTTKSFGDNSVVMVYDFLPSAETLMARHFSQPPQL
NGFLDPFQDPSIPRPYSAQKNAVLRQQSSLMPESLIWSYVIQLTGALRLVHGSGLACRVL
DPTKVLVTGQDRVHVNCCGVLDVLMFDNNASNPLAMVPHYQQEDLVGLGKLLLALSCNSV
LAVQRENFNTSISIVERHYSADLKALIMSLLLSPSAGRQRSIEDVMPMIGARFYTQLDSA
HLLAERLEDELAKEVQNGRLFRLLAKLSAITERPELNLEGAWAETGDRYMLKLFRDYVFH
AVTDDGRPFMDMAHVVQCLNKLDAGSSDKICLMSRDMQNVLVATFAELKQCFQRSFHEIF
ESTMAKESGGS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgacatctccgccgacggtgacgccgccgtacacggcatacgtggccacgccgccgcgc
gtcgccgacgccaagagcgccgcagccgccgccacccacccggccagcttcttcgtcagc
gacgagctgcgcgagctgatcctgcgccagcagaacctgctgctcatgcaccccaacccg
caagcgtacccggatctgccgaacgaggtggacaactatcacgagctgtgtcccctggag
gctcctggccagccccacaagtccactgcgttcggctacatcaccacctgttacaaggcc
accaacatgaagagcggacagtgctactgcctgcgacggatacatgggctgcggctggcc
ggcaccaagtgtctgcagctggtcgcgctctggagcaaattacaacatgctggtctggtc
acattgcgtgagctcttcaccaccaagagcttcggcgacaattccgtggtaatggtgtac
gacttcctgccgagcgccgagacattgatggcgcgccacttcagccagccgccgcagctg
aacgggttcctggacccgttccaggacccgagcataccgcggccgtacagtgcccagaag
aacgccgtcctccgccaacagagctcgctgatgcccgagtcgctgatctggagctacgtc
atccagctgacgggcgcgctgcggctggtgcacggcagcgggctggcctgtcgcgtgctc
gaccccaccaaggtcctcgtcaccggtcaggatcgtgtgcacgtgaattgttgcggcgta
ctggacgtgctcatgttcgacaacaatgcgtccaacccgctggcaatggtgcctcactac
cagcaggaggatctggtgggcctggggaagctgctgctggcgctctcctgcaactctgtg
ctggccgtgcagcgggagaacttcaacaccagcatcagcatagtcgagcgtcactactcg
gccgacctcaaggcactcatcatgagtctgctgctgtcgccgtcggcgggccgccagcgc
agcatcgaggacgtgatgccgatgattggcgcccggttctacacgcagctggactcggcc
cacttgctggcggagcggcttgaggacgagctggccaaggaggtgcagaacggccgcctc
ttccggctgctggccaagctgtccgccatcaccgagcggcccgagctgaacctggagggc
gcctgggcggagacgggcgaccgctacatgctgaagctgttccgggactacgtgttccac
gcggtgacggacgacggccgcccgttcatggacatggctcatgtggtccagtgtctgaac
aagctggacgctggctcctctgacaagatctgcctcatgtcgcgcgacatgcagaacgtg
ctggtggccacgttcgccgagctgaagcagtgtttccagcgctccttccacgagatcttc
gagtcgaccatggccaaggagtctggtggctcctag
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