Pollicipes pollicipes (gooseneck barnacle): 119107359
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Entry
119107359 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: ribonuclease 3-like
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119107359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119107359
03009 Ribosome biogenesis [BR:
ppoi03009
]
119107359
03036 Chromosome and associated proteins [BR:
ppoi03036
]
119107359
Enzymes [BR:
ppoi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
119107359
Messenger RNA biogenesis [BR:
ppoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
119107359
Ribosome biogenesis [BR:
ppoi03009
]
Eukaryotic type
90S particles
RNase
119107359
Prokaryotic type
rRNA processing factors
119107359
Chromosome and associated proteins [BR:
ppoi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
119107359
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
CPSase_L_D2
Ribonuclease_3
Ribonucleas_3_3
Biotin_carb_N
dsrm
RM44_endonuclase
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
DSRM_MRPL44
ATP-grasp_LDMS
Motif
Other DBs
NCBI-GeneID:
119107359
NCBI-ProteinID:
XP_037086680
LinkDB
All DBs
Position
Unknown
AA seq
1505 aa
AA seq
DB search
MSGEKATTQSEDMPNRSSNQMKQHIVVATPEELVKRLGGNKAINRILIANNGIAAVKCMR
SIRRWAYVDVPQREANAEYSPHGRPLRAGAGGHQHNNYANVELIVDIAKRMSVQAVWAGW
GHASENPKLPELLHKNNIVFIGPPEKAMWALGDKIASSIVAQTADIPTMPWSGSGLKAQW
SEKTKATXSLRISSELYKAGCVASEDQGLEAARRIGFPVMIKASEGGGGKGIRKVESEDQ
FFNQYRQVRTEVPGSPIFVMKMATRARHLEVQLLADQYGTAISLFGRDCSIQRRHQKIIE
EAPCIIAEPDVRAHGAGRAAVRLAKMVGYVSAGTVEYLFDEHGHFYFLELNPRLQVEHPC
TEMITDINLPAGQLQVKDCPVREDARLRDEARRAREDSRPRRAEDEDRRRREDRRREREG
ERKRHRPDEDGGGERTRARREDGDSERTRARRDEDGGGERTRARREEDGGGERTRARREE
ASAGRRREQVRRVRPRAGPDPASRELTAADLVSDSAISERDKRFEEEERQLREKREMIRL
ALDDEKKIWTRSSPADPYYQRHPQDTHVMVATERTRAQCGRFRTELAERAALTPPGSRCR
LHNCGGSESDETSSDSESEDETVLLNEELERKSRHPYRLHPELWYNDPGKMNVGDVCRCS
IKSRQAGIRHNIYAGEEAVPRCDPWTNNADRLFHYRVLICPPTNFLVSSPTSIQHDGHEF
IFEGLSLLSHYRLTELPPCHIIRFNIEYTVLYIEEKLPDNFVLEEVELFKSFLYDSLLEM
VDLDLFPHADADKQGCPVFHLFPRFVRDIADNGKEILSLNEVLAYLLRSDGPLVADDELA
AVAALPLWEWQARADKVRGMLVTHPGRKPSCIRLDQLDREVLPGGEQPAEGELHHPEIVH
FGIRPPQLSYAGNPEYQKAWREYVKYRHLLANLPKPSMEDKRKLMAKESQLQNLRLQAKL
KRDVTVSVSSRGFRKTGLMADVVQHALFLPVLVCHLRFHKSLDVLEETIDYRFKNRWLLQ
LALTHPSYRENHGTNPDHSRNSLSNCGIRQPEYGDRCINYTASRKRGLNILINIMSQFGK
KEATESRITHNERLEFLGDAVVEFLTSIHLFFMFPNLEEGGLATYRAAIVQNQHLAVLAR
HLRLHEYLLYAHGSDLCHDLELRHAMANCFEALMGALFLDAGIEVADKVFSRTLYVDDDR
LLAIWQHYPPHPLQEQEPRGDRKWIDKFPRLQQMREFEKLVGVEFMHIRLLARSFTDRSI
GFNNLTLGSNQRLEFLGDTVLQLIASEYLYRHFPEHHEGHLSLLRSSLVNNRTQAVVCTD
LGMTEFAAYSHLKTEIKMKDKADLLEAFIGALYVDKGLEFCRKFCEVCFFPRLQLFILNQ
DWNDPKSKLQQCCLTLRNMDGSEPDIPVYKVIECMGPTNTRVYSVAVYFQGKRLAKASGH
SIQMAEMNAATMALANCKHLFPQLDHQNRVIAKSIRIQTKRLEEQLADGCGAAAASSSSS
SVPRE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtgaaaaggcaaccacacaaagtgaagatatgcccaatagatcatccaaccaa
atgaagcaacatatagtagtggctactcctgaagaactggtaaaacggctgggaggcaac
aaagctatcaacaggatactgatcgccaacaatggcatcgctgccgtcaagtgcatgcga
tccatacgacgctgggcgtacgtagatgttccgcaacgagaagccaacgctgagtacagt
ccgcatggccgaccactacgtgccggtgccggggggcaccaacataacaactacgccaac
gtcgagttgatcgtcgacatcgccaagcggatgtcggtgcaggcggtgtgggccggctgg
ggccacgcctcggagaacccgaagctgcccgagctgctgcacaagaacaacatcgttttc
atcgggccgccggagaaggccatgtgggcgctgggtgacaagatcgcctccagcatcgtg
gcgcagacggccgacattccgacgatgccctggtccggctccggtctgaaggcgcagtgg
agcgagaagacgaaggccacgngctcgctgcgcatctcgtccgagctctacaaggccggc
tgcgtggccagcgaggatcagggcctcgaggccgcccgtcgcatcggttttccggtcatg
atcaaggcgtccgagggcggcggcggcaagggtatccgtaaggtggagtccgaggaccag
ttcttcaaccagtaccgccaggtgcgcacggaggtgccggggtctccgattttcgtgatg
aagatggcgacgcgcgcgcgccacctggaggtgcagctgctggcggaccagtacggcacg
gctatctcgctgttcggccgcgactgctccatccagcggcgacaccagaagatcattgag
gaggcgccctgtatcatcgccgaaccggacgttcgagcgcatggagcaggtcgggccgcc
gtgcgactggccaagatggtgggctacgtgagtgccggcaccgtcgagtatctgttcgac
gagcacggccacttctacttcctcgagctgaacccgcgcctgcaggtggagcatccctgc
acggagatgatcactgacatcaacctaccggccggccagctgcaggtgaaagactgcccg
gtccgtgaggacgctcggcttcgggacgaggcccgccgtgcgcgtgaggacagtcggcca
cggcgcgccgaggacgaggaccggcgccgacgcgaggaccggcgccgcgagcgcgagggc
gagcggaaacggcatcggcctgacgaggatggcggcggtgagaggacgcgcgcgcggcgc
gaggacggcgacagtgagaggacgcgggcacgacgagatgaggacggcggcggtgagagg
acgcgggcgcgacgagaagaggacggcggcggtgagaggacacgtgcgcggcgcgaggag
gcgtcggccgggcggcgccgggagcaggtgcgccgggtgcggccccgagccggcccggac
ccggccagccgggagctgacggctgcagatctggtgtccgactcggccatatcggagcgg
gacaagcggttcgaagaggaggagcggcagctgcgcgagaagcgcgagatgatccggctg
gcgctggacgacgagaagaagatctggacgcgctcatcgccggccgacccgtactaccag
cgccacccccaggacacgcacgtcatggtggccacggagcgcacgcgcgcccagtgcggc
cgcttccgcaccgaactggcggagcgggcggccctcacgccgcccggcagccgctgtcgc
ctgcacaactgcggtggcagcgagagcgacgagacgtccagcgactcggagagcgaggac
gagacggtgctgctgaatgaggagctcgagcgcaagagccggcacccgtaccgcctgcac
ccggagctctggtacaacgaccccggaaagatgaacgtgggtgacgtgtgccggtgcagc
atcaagtcgcgccaggccggcatccgacacaacatctacgccggcgaggaggcggtgccg
cgctgcgacccctggaccaacaacgccgaccgcctctttcactaccgcgtgctcatctgt
cccccgaccaacttcctggtcagcagcccgaccagcatccagcacgacgggcacgagttc
atcttcgagggcctctcgctgctgtcgcactaccggctgaccgagctgccgccctgccac
atcatccgcttcaacatcgagtacacggtgctgtacatcgaggagaagctgcccgacaac
tttgtgctggaggaggtggagcttttcaagagtttcctgtacgacagtctgctggagatg
gtcgacctggacctgttcccgcacgctgacgccgacaagcagggctgccctgtgttccac
ctgttccccagattcgttcgcgacatcgccgacaacggcaaggagattttgtcgctgaac
gaggtgctggcgtacctgctgcggagcgacggccccctggtggccgacgacgagctggcg
gccgtggcagcgctgccgctgtgggagtggcaggcgcgcgccgacaaggtccgagggatg
ctggtgacgcacccgggccgcaagccgagctgcatccggctggaccagctggaccgcgag
gtgctgcccggcggcgagcagccggccgagggcgagctgcaccacccggagatcgtgcac
ttcggcatccggcccccgcagctcagctacgccggcaacccagagtatcagaaagcgtgg
cgcgagtacgtcaagtaccgccacctgctggccaacctgcccaagccgtcgatggaggac
aagcgcaagctgatggccaaggagtcgcagctgcagaacttgcggctgcaggcgaagctg
aagcgggacgtcaccgtgtccgtgtcgagccggggattccgcaagaccggcctcatggcg
gacgtggtgcagcacgcgctgttccttccggtgctggtgtgccacctgcgattccacaag
tcgctggacgtgctggaggagaccatcgactaccggttcaagaaccgctggctgctccag
ctggcgctgacccaccccagctacagggagaaccacggtactaacccggaccactcgcgc
aactcgctctccaactgcggcatccggcagcccgaatacggagaccgctgcatcaactac
accgcctcgcgcaaacgcggtctgaacatcctcatcaacatcatgtcgcagttcggcaag
aaggaggctaccgagagtcgcatcacccacaacgagcggctcgagttcctcggcgacgcc
gtcgtcgagttcctcacctccatccacctcttctttatgtttccgaacctagaggagggc
ggtctggccacctacagggcagccatcgtgcagaaccagcacctggccgtgctggcgcgc
cacctgcggctgcacgagtacctgctgtacgcgcacggctccgacctttgccacgacctc
gagctccggcacgccatggccaactgtttcgaggcgctgatgggcgcactcttcctcgac
gccggcatagaggtggccgacaaggtcttctcccgcacgctgtacgtggacgacgaccgg
ctgctggccatatggcagcactacccgccgcacccgctgcaggagcaggagccgcgcgga
gaccgcaagtggatcgacaagttcccacggcttcagcaaatgcgcgagttcgagaagctg
gtgggtgtcgagttcatgcacatccgcctgctggcgcgctccttcaccgaccgcagcatc
ggcttcaacaacctcacgctgggctccaaccagcggctggagtttctcggcgacaccgtg
ctccagcttatcgcttcggagtacctgtaccgccacttccccgagcaccacgaggggcac
ctgtcgctgctgcgctcctctttggtcaacaaccgaacacaggcggtggtgtgcacggac
ctgggcatgacggagttcgccgcgtacagccacctcaaaaccgagatcaagatgaaggac
aaggccgatctgttggaggccttcatcggcgcgctctatgtggataaaggcctcgagttc
tgccgaaagttctgcgaggtctgcttcttcccgcgcctgcagctgttcatcctaaaccag
gactggaacgaccccaagtcgaagctacagcagtgctgcctcacgctgcgaaacatggac
ggctcggagccggacatccccgtgtacaaggtgatcgagtgcatgggcccgaccaacacg
cgcgtctactcggtggccgtgtacttccaaggcaagcggctggccaaggcgtccggccac
agcatccagatggccgagatgaacgctgctaccatggcgctggccaactgcaaacacctg
ttcccgcagctggaccaccagaaccgtgtcatcgccaagagcattcgtatccagactaag
cggctggaggagcagctggctgacggctgcggcgccgctgccgccagctccagctccagc
tccgtgccgcgcgagtag
DBGET
integrated database retrieval system
