Pollicipes pollicipes (gooseneck barnacle): 119107671
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Entry
119107671 CDS
T08250
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi04140
Autophagy - animal
ppoi04142
Lysosome biogenesis
ppoi04145
Phagocytosis
ppoi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
119107671
04142 Lysosome biogenesis
119107671
04140 Autophagy - animal
119107671
04148 Efferocytosis
119107671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppoi04131
]
119107671
Membrane trafficking [BR:
ppoi04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
119107671
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CNH
Vps39_1
zf-Vps39_C
TPR_Vps41
Clathrin
Zn_ribbon_SprT
DUF2175
Motif
Other DBs
NCBI-GeneID:
119107671
NCBI-ProteinID:
XP_037087090
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MHEAYECIPILEKLPLQIESIATFDDKVAVGTRQGHLLLYAVKPSSKPCRCDVQLLRSNK
NFSKKAVVQVDVLQEYQTLICLSDNLVTAHDLGSFNFNLFTSIPRTKGASMFKVDIQRQT
SLTGDQSLAVRLCVAVKRKLQLYYWKNREFHELMSDLAVPDVPRSLAWNRNAICVGLRTD
YFLLKLSGEERELFPTGKSGEPNIVHLGGERLALLRDQQTIFIDGDGMPTQKLAVTWSQV
PHALLYDAPYLIALCASHVEVRSIEPRLHIQTIPWPAPRFVTRNAAGQIIVASSSHLWLL
KAVAVDVQVNSLVQEKQFQLALELANLADGPEEEKTKQIQHIQNLHAFDLFTKKQFKDAM
TIFLDLNTDPSHVIGLFPDLLPQQYWNQLEYPDSLPDLQGRDMENGLLALADYLTQVRHN
LLKDSSSNTVCNMAIVEGSGTVRSRSQLLQIVDTTLLKCYLQTNSALVASLLRLKDNHCH
LEETEHALKKDHKFAELIILYQTRQFHRKALEMLLRQSGRADSSLYGFDRIIHYLQHLGP
DHMDLVEEFARPVLQESAEEGLLIFTDDLQEVEALPRPRVCEYLRRTAPQLLPQYLEHVI
DVWHETHPMFHNELLYRYRALAQEAEGAAAAEHRRKLVTLLRRSQHYIPEQILVHFPHDA
FFEERAILLGRLGRHEQALTIYVHILREPEKALEYCREHYNPDRPADAKVYLSLLVQLAT
EVSPLPPDLPAALRLLEQHGDKMDPVQALALLPGPLRVSRLARFLCSTLAQRQTVRRRGQ
LSRALQQRESLLAREARLRHQRQRVVLLDGQTCPVCGKRFAAQSVFARLPNGDVVHYACR
QTDQQLPGA
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagcatatgaatgtataccaattttggaaaagcttcctctgcaaattgaatca
atagctacatttgatgacaaggtggctgttggtacaaggcaaggccatttgcttctgtat
gctgtgaagccaagctccaagccatgcagatgtgatgttcagctactcaggtctaacaag
aacttttccaagaaagctgttgtgcaagttgatgtgctccaggagtaccaaaccctcatc
tgcctatctgataacctagtgacagctcatgatctgggatcgttcaacttcaacctgttt
acttccatacccagaacaaaaggcgcctctatgttcaaggtcgacattcagcgtcagacc
agtctgaccggtgaccagtcgctggcggtgcggctgtgcgtggccgtcaagcggaagctg
cagctgtactactggaagaaccgcgagttccacgagctgatgtcggacctggccgtgccg
gacgtgccgcgctcgctcgcctggaaccgtaacgccatctgtgtcggcctgcgtaccgac
tacttcttgctgaagctgtccggcgaggagcgcgagctgttccccacgggcaagtctggc
gagccgaacatcgtccacctgggcggcgagcggctggcgttattgcgcgaccaacagacc
atcttcatcgacggcgacggcatgcccacgcagaagctggccgtcacgtggtcgcaggtg
ccgcacgccctcctgtacgacgcgccgtacctgatcgcgctctgcgcctcgcacgtggag
gtgcgctccatcgagccccggctgcacattcagacgatcccgtggccggcgccgcgcttc
gtcacgcggaacgcggccgggcagattatcgtggcatcgtcgtcgcacctctggctgctg
aaggctgtggccgtggacgtccaggtcaacagcctggtgcaggagaagcagttccagctg
gcgctggagcttgcgaatctagcggatggtccggaagaggagaagaccaagcagattcag
cacatccaaaacctgcatgcgttcgatctcttcaccaagaaacagttcaaagatgctatg
acgatattcctagacctgaacaccgacccgtcgcacgtgatcggcctgttcccggacctg
ctgccgcagcagtactggaaccagctggagtacccggacagcctgccggacctgcaaggc
cgcgacatggagaacggcctgctggcgctggcggactacctcacgcaggtgcggcacaac
ctgctgaaggacagtagcagcaacaccgtctgcaacatggcgatcgtggagggcagcggc
acggtgcgctcccgctcgcagctgctgcagatcgtggacacgacgctgctcaagtgctac
ctgcagacaaactcggccctggtggcgtcgctgctccgcctcaaggacaaccactgccac
ctggaagagacggagcacgccctgaagaaggaccacaagttcgccgagctcatcatcctg
taccagacgcgccagttccaccgcaaggcgctggagatgctgctccggcagagtggccgc
gccgactccagtctgtacggcttcgaccggatcatacactacctgcagcacctgggtccg
gaccacatggatctggtggaggagttcgcgcggccggtcctgcaggagagcgccgaggag
ggcctgctcatctttaccgacgacctgcaggaggtggaggcgctgccgcggccgcgtgtc
tgcgagtacctccggcgcactgcgccgcagctgctgccccagtacctggagcacgtgatc
gacgtgtggcacgagacgcacccaatgttccacaacgaactgctgtaccggtaccgggcg
ctggcgcaggaggcagagggcgccgccgccgccgagcaccgccgcaagctggtgacgctg
ctgcgccgttcgcagcactacatccccgagcagatcctggtgcacttcccgcacgacgcg
ttcttcgaggagcgcgccatcttgctgggccggctaggtcggcacgagcaggcgctcacc
atctacgtgcacatcctgcgggagccggaaaaggcgctcgagtactgccgcgaacactac
aacccggaccggccggccgacgccaaggtgtacctgtcgctgctggtgcagctggccact
gaggtgagcccgctgccgcccgacctgccggccgcgctccggctgctggagcagcacggc
gacaagatggaccctgtccaggcgctggcgctgctgccgggtccgctgcgcgtcagtcgg
ctggctcgcttcctgtgctcgacattggcgcagcgacagacggtgcggcggcgcggccag
ctgtcgcgcgcgctgcagcagcgcgagagcctgctggcgcgcgaggcccggctgcgccac
cagcgccagagggtggtgctgctcgacggccagacctgtcctgtctgcggcaagcggttc
gccgcgcagagcgtgttcgcccggctgccgaacggcgacgtggtgcactacgcctgtcgt
cagaccgaccagcagctgccgggggcgtga
DBGET
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