Pollicipes pollicipes (gooseneck barnacle): 119108120
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Entry
119108120 CDS
T08250
Name
(RefSeq) ATP-dependent helicase brm-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119108120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoi03021
]
119108120
03036 Chromosome and associated proteins [BR:
ppoi03036
]
119108120
Transcription machinery [BR:
ppoi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119108120
Chromosome and associated proteins [BR:
ppoi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
119108120
Chromatin remodeling factors
BAF complex
119108120
PBAF complex
119108120
GBAF(ncBAF) complex
119108120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
SnAC
HSA
BRK
ResIII
QLQ
DEAD
HDA2-3
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
119108120
NCBI-ProteinID:
XP_037087593
LinkDB
All DBs
Position
Unknown
AA seq
1236 aa
AA seq
DB search
MSGGIEPRATAVPNRSSASLFQQHQLQQLKAQIMAYRLLARNQPIPSNFLNLAIGDPLLL
LDERENRLAARISLRIDQLSGLPGSLAEDVRMRSQIELRALRLLNFQRQLRQEVLEMTRR
DTTLETVHNPTLYKRKKRQGLREARITERLEKQQRYEAEKKKRQKHMEYLAAVLQHGKEL
REFHRNGQLRLQKVNKAVQVHHANTEREKQKEQERIEKERMRRLMAEDEEGYRKLIDQKK
DKRLALLLQQTDEYIANLTEMVKQHKAELRRKKLEHERARHDGDPSEQRVIVTNTESGLT
LAGEEAPRAAELQAWLDAHPGWVVAPDEYEDDPEEEQQEQKQGQEHGQGQTVEPEAEGDP
AATASKTRADDDEYKKAEGEANYYSIAHAIHETVTEQASIMVNGKLKEYQVKGLEWLVSL
YNNNLNGILADEMGLGKTIQTIALVTYLMEKKKVNGPYLIILPLSTLSNWVLEFEKWAPS
VRVVAYKGSPAARRHIQNQMRASKFNVLLTTYEYIIRDKAALSKSRWKYMIIDEGHRMKN
HHCKLTMVLNTSYGAPHRLLLTGTPLQNKLPELWSLLNFLLPSIFKAVSTFEQWFNAPFA
TTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIIKCEMSAVQRLLY
RHMQSKGIMLTDGKSGGAGRGGSKALMNTIMQLRKLCNHPFMFQHIEEAYCKHAGFPSNV
VTGPDLFRASGKFELMDRILPKLKHCGHRVLLFCQMTQLMAIMEDYLNYKCYKYLRLDGT
TKAEERGDLLKAFNEPNSEYFLFMLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDR
AHRIGQKNEVRVLRLMSVNTVEERILAAAKYKLNMDEKVIQAGKFDQKSTGTERRQMLQS
ILQDEELDEEEENEVPDEETVNQMIARSEEELQIYQQLDLERRRDEARLGAQRRPRLIEE
SELPDWLLRDEAEIDELTREEDDSGLFGRGSRARKEVDYSDRLNDRDWLRAIGAVDEDGN
EILEDEEEEQVKKRGRRAGPSRSSGTGRKRARDDEDERPRKKRGRPSGVVAVTPRMRRAM
RSAVQSLVDYTDADGRVLIDPFFKLPSRKELPDYHEVIKKPMDVKRMLGKIEDSKYGDLD
DLEADVTLMCKNAQQYNEETSLIYEDSIVLERVWAAARRQTELQLAAAPDNENDEEEDEE
DSSSKRKSRGSRHVPKKRRKRIVEDEEDEDEDEELG
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgggatcgaaccgagggcgacggctgtgcccaaccgatcgtcggccagcctg
ttccagcagcaccagctccagcagctgaaggcgcagatcatggcgtaccggctgctggcc
cgcaaccagcccatccccagcaacttcttgaacctggccatcggagacccgctgctgctg
ctggacgagcgtgagaaccggctggcggcgcgcatttcgttgcgtatcgaccagctgagc
ggcctgcccggctcgctggccgaggacgtgcgcatgaggtcgcagatcgagctgagagcg
ctgcgcctgctcaactttcagcgccagctgcggcaggaggtgctggagatgacccggcgg
gacaccacactcgagacggtccacaacccaaccctctacaagcgtaagaagcgccagggc
ctgcgcgaggcgcgcatcacggagcgtcttgagaagcagcagcgctatgaggccgagaag
aagaagcgtcagaaacacatggagtacctggcggcggtgctgcagcacggcaaggagctg
cgcgagttccaccgcaacggccagctgcggctgcagaaggtgaacaaggctgtgcaggtg
caccacgccaacacggagcgcgagaaacagaaggagcaggagcgcatcgagaaggagcgc
atgcgccgactgatggccgaggacgaggagggctatcgcaagctcatcgaccagaagaag
gacaagcggctggcgctgctgctgcagcagaccgacgaatacatcgctaacctcaccgag
atggtcaagcagcacaaggcggagctgcgacgcaagaagctggagcatgagcgggcgcgc
cacgacggcgacccgagcgagcagcgcgtgatcgtcacaaacaccgagagcggcctgacg
ctggccggcgaggaggcgccgcgcgccgccgaactccaggcgtggctggacgcccacccg
ggctgggtggtggcgccggacgagtacgaggatgacccggaggaagagcagcaggagcag
aagcagggtcaagagcacggtcaggggcagaccgtcgagccggaggcagagggcgacccc
gcagccaccgcctccaagacgcgcgccgacgatgacgagtataagaaggctgagggcgag
gccaactactacagtatcgcccacgccatccatgagacggtgacggaacaggcgtccatc
atggtgaatggcaagctgaaggaataccaggtcaagggtctcgagtggcttgtctccctg
tacaacaataacttgaatggaattttggcggacgagatgggtctgggcaagactatccag
acgatcgcgctcgtcacctacctgatggagaagaagaaggtgaacgggccgtacctcatc
atcctgccgctctccacgctctccaactgggtgctggagttcgagaagtgggcgccgtcg
gtgcgcgtggtggcctacaagggctcgccggcggctaggcgccacattcagaaccagatg
cgcgcctccaagttcaatgtgctgctcacaacgtacgagtacatcatccgcgacaaggca
gcgctctccaagagccgctggaagtacatgatcatcgacgagggccaccgtatgaagaac
caccactgcaagcttaccatggtgctgaacacgtcgtacggcgcgccgcaccggctcctg
ctgacgggcacgccgctgcagaacaagctgcccgagctgtggtcgctgctcaacttcctg
ctgccctccatcttcaaggccgtctccaccttcgagcagtggttcaacgcaccgttcgcc
accactggggaaaaggtggagctgaatgaggaggagacgatcctcatcatccgccgactg
cacaaggtgctgcgcccgttcctgctgcgccgcctcaagaaggaggtcgagtcccagctg
cccgacaaggtggagtacatcatcaagtgcgagatgtcggccgtgcagcgtctgctctac
cggcacatgcagtccaagggcatcatgctgacggacggcaagagcggcggcgccggccgc
ggcggctccaaggcgctcatgaacaccatcatgcagctgcgcaagctgtgcaaccacccg
ttcatgttccagcacatcgaggaggcatactgcaagcacgccggcttcccgagcaacgtc
gtgacgggacccgacctgttccgggcgtcgggcaagttcgagctgatggaccggatcctg
cccaagctgaaacactgcggccaccgcgtgctgctcttctgccagatgacgcagctgatg
gccatcatggaggactatctcaactacaagtgctacaagtatctccggctggacggcacc
accaaagcagaggaacgtggtgacctgctgaaggccttcaacgagcccaactcagagtac
ttcctcttcatgctgtccactcgcgccggaggactgggcctcaacctgcagacggcggac
acggtggtgatcttcgacagcgactggaacccgcaccaggacctgcaggcgcaggaccgc
gcccaccgcatcggccagaagaacgaggtgcgcgtgctccggctcatgtccgtcaacacg
gtcgaggagcgcatcctggccgccgccaagtataagctgaacatggacgagaaggtgatc
caggctggcaagtttgaccagaagtcgacgggcacggagcgccgccagatgctgcagagc
atcctgcaggacgaggagctggacgaggaggaggagaacgaggtgcccgacgaggagacg
gtgaaccagatgatcgcgcgcagcgaggaggagctgcagatctaccagcagctggacctg
gagcggcggcgcgacgaggcgcgcctgggcgcccagcgccggccgcgcctcatcgaggag
tccgagctgcccgactggctgctgcgcgacgaggccgagatcgacgagctgacgcgggag
gaggacgacagcggcctgttcggccgcggcagccgcgcccgcaaggaggtcgactactcg
gaccggctcaacgaccgagactggttacgcgccatcggggcggtggacgaggacggcaac
gaaattctggaggacgaggaggaagagcaggtcaagaagcgtggccggcgcgcgggtccg
tcccgttcatccggcactgggcgaaaaagagcgcgcgacgatgaggacgagcggccacgc
aagaagcgaggccgaccgagcggcgtggtggccgtcaccccgcgcatgcgcagagccatg
cgcagcgctgtccagagccttgttgactacacggacgcggacggccgagtgctcatcgat
ccgttctttaagctgccgtcgcggaaggagctgccggactaccacgaggtcatcaagaag
ccgatggacgtcaagaggatgctgggcaagatcgaggacagcaagtatggtgacctggac
gacctggaggccgacgtcacgctcatgtgcaagaacgcccagcagtacaatgaggagacg
tcgctgatctacgaggacagcatcgtgctggagcgagtgtgggcggcggcgcggcggcag
accgagctgcagctggcggccgcgcccgacaacgagaacgacgaggaagaggacgaggag
gactcctcctcgaagcgcaagtctcgcggtagccgtcacgtcccgaaaaagcgccggaag
cggatcgtggaggacgaggaagacgaggatgaggacgaagagttgggctag
DBGET
integrated database retrieval system
