Pollicipes pollicipes (gooseneck barnacle): 119108127
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Entry
119108127 CDS
T08250
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03420
Nucleotide excision repair
ppoi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119108127
09124 Replication and repair
03420 Nucleotide excision repair
119108127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppoi04121
]
119108127
03400 DNA repair and recombination proteins [BR:
ppoi03400
]
119108127
Ubiquitin system [BR:
ppoi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
119108127
DNA repair and recombination proteins [BR:
ppoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
119108127
TCR (transcription coupled repair) factors
Cul4-CSA complex
119108127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
119108127
NCBI-ProteinID:
XP_037087603
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MSHNYVVTAQKPTAVNHCVTGNFTSSSDLNLIMAKNNRLEVFIVSPEGLQPVKEIGIYGL
IAVMKLFRPCDEEKDLLFIVTQHYNAMILECVGRGESLEVVTKVHGNVADRIGKPAETGI
IGIIDPEARCIALRLYDGILKIIPLEKESSELKAYNIRLEELTVQDIEFLYGCPNPTVIL
IHQDVHGRHVKTHEISLKEKEFIRSPWKQENVEPEAAMIVPIPGPLYGALIVGQESITYH
NGSTYITVAPPIIKQSTMTCYGRVDPTGGRYLMGDMAGRLFMVLLEREERDGAERDIKVE
LLGECSIPECINYLDNGVVFVGSRLGDSQLVQLRVTPDESSSYLTVLDAHTNLAPILDMV
VVDLERQGQGQLVTCSGAFKDGSLRVIRNGIGIHELASIDLAGIKAMWSLRVGTSGDDDG
DELFDNTLVIAFVGETRVLSLIGEEVEETEISGLAGDQQTFFCSNVDHGQILQVTTTSAR
LLSDKSGALRSEWRPPGGRTISVVTANAGQLACAVGSELFYLEIADGEVVLKSTATLEHE
VACIDLTPAGGRTRAHLVAVALWTDISARTLSLPELRPLSKECLGGEIIPRSILLAEFEG
VPYCLVAMGDGSLFYFHVHLETGMLTEKKKVTLGTQPTVLRAFRPHSTSSVFACSDRPAV
IYSSNYKLVFSNVNLREVGHMCTLNTRAYRNSLALATETTITIGVVDDIQKLHIRSVKLF
ESPRRIAYQEPTETFGVLSMRLDVQEANGLAALRPSASTGAKSVSQSSAAQLHRPSLQQL
EQGQEVEVHSLLIIDQHTFEVQHAHSFVPSEYALSLISTRFDNDPAVYFVVGTAYVNPEE
SEPKQGRIVVFQFHDQKLTQIAEKEIKGACYSLAAFNGKLLASINSTVRLFEWTMEHELR
LECSHFNNIVALYLKTKGDFVLVGDLMRSITALQYKAMEGNFDEMARDFNAKYMTAVEIL
DDDTYLGAENSHNLFVCQKDSAATTDEERMQMQEMGRYHVGDMVNVFRHGSLVMQGVTEN
MAPTSGCVLFGTVQGSVGLVTQLEPDFYAFIAELQQQLTRVIKPVGKIEHAAWRAYRSER
KTEPCEGFIDGDLIESFLDLNRDQMAEVVRDLMITDASGQRRPATVDDIIKAVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacaactatgttgtgacggctcagaagccaacagcagttaatcactgtgttact
ggcaacttcacgtcatcctcggacctgaacctgatcatggccaagaacaaccgactggag
gtgttcatcgtgtcgccggagggcctgcagcccgtgaaggagatcggcatctacggcctg
atcgccgttatgaagctgttccgaccctgcgacgaggagaaggatctgctgttcatcgtg
acgcagcactacaacgccatgatcctcgagtgtgtgggccgcggcgagtcgctcgaggtc
gtcaccaaggtgcacggcaacgtggcggaccgcatcggcaagccggctgagacgggcatc
atcggcattatcgacccggaggcgcgctgcatcgcgctgcgcctgtacgacggcatactg
aagatcatcccgctggagaaggagagcagcgagctcaaggcctacaacatccgactggag
gagctgacggtgcaggacatcgagtttctgtacgggtgcccgaacccgactgtgatactg
atccaccaggacgtgcatggccggcatgtcaagacccacgagatctcgctcaaggagaag
gagttcatcaggagcccgtggaagcaggagaacgtggagccggaggcggccatgatcgtg
cccatcccgggtccgctgtacggcgcgctcatcgtcggccaggagtccatcacgtaccac
aacggcagcacctacatcaccgtggcgccgcccatcatcaagcaaagcacgatgacctgc
tacggccgcgtggacccgaccggcggtcgttacctgatgggcgacatggccggccgcctg
ttcatggtgctgctggagcgggaggagcgcgacggcgccgagcgcgacatcaaggtggag
ctgctcggcgagtgcagcatccccgagtgcatcaactacctggacaacggcgtggtgttc
gtcggctcgcggctgggcgactctcagctggtgcagctgcgcgtgacgcccgacgagagc
agctcctacctgaccgtgctcgacgcgcacaccaacctggcgcccatcctggacatggtg
gtggtggacctggagcgccagggccagggccagctggtcacctgctccggcgccttcaag
gacggcagcctgcgagtcatcaggaacggcatcggcatccacgagctggccagcatcgac
ctggccggcatcaaggccatgtggagtctgcgcgtgggcactagcggcgacgacgacggc
gacgagctgttcgacaacacgctggtcatcgcgttcgtcggcgagacccgggttctgagc
ctgatcggcgaggaagtggaagagaccgagatctcggggctggctggcgaccagcagacc
ttcttctgcagcaacgtggaccacggacagatactgcaggtgacgaccacctctgcgcgc
ctgctgagcgacaaatccggcgcgctgcgcagcgagtggcgcccgccgggcggccgcacc
atcagcgtggtgacggccaacgccggccagctggcgtgcgctgtcggcagtgagctcttc
tacctggagatcgccgacggcgaggtcgtgctgaagagtaccgccacgctggagcacgag
gtggcctgcatcgacctgacgccggccggtggccggacgcgggcccacctggtggccgtg
gcgctctggaccgacatctcggcgcgcacgctctcgctgccggagctgcggccgctctcc
aaggagtgcctcggcggcgagatcatccccaggtccatcctgctggccgagtttgagggc
gtgccctactgcctggtcgccatgggggacggctcgctcttctactttcacgtgcacctc
gagaccggcatgcttacggaaaagaaaaaggtgacgctgggcacgcagccgactgtgctg
cgggcgttccgacctcactcgaccagcagcgtgtttgcctgctccgaccggccggccgtc
atctacagctccaactacaagctggttttttccaatgtcaacctgcgcgaagtcggccac
atgtgcacgctcaacacgcgcgcctaccgcaacagcctggcgcttgcaacggagacgaca
atcactatcggcgtagtggacgacattcagaagctgcacatccgctctgtgaagctgttc
gagtccccgaggcggatcgcctatcaggagccgaccgagacgttcggcgtgctctcgatg
cggctggacgtgcaggaggccaacgggctggcggcgctgcggccgtcagcctccaccggc
gccaagtcggtcagccagtcgtcggcggcccagctgcaccggccctcgctgcagcagctg
gagcagggacaggaggtggaggtgcacagcctgctcatcatcgaccagcacacgttcgag
gtgcagcacgcgcactcgttcgtgccgtccgagtacgcgctcagcctcatctcgacccgg
ttcgacaacgacccggccgtctacttcgtggtcggcacggcctatgtcaaccccgaggag
tcggagcccaagcagggtcgcatcgtagtgttccagttccatgaccagaagctcacccag
atagccgagaaggaaatcaagggcgcctgctacagcctggctgccttcaacggcaaactg
ctggccagcataaacagcacggtgcgcctgttcgagtggaccatggagcacgagctgcgg
ctggagtgcagccacttcaacaacatcgttgctctctacctcaagaccaagggtgacttc
gtgctggtcggcgacctgatgcgctcgattactgccctccagtacaaggccatggagggc
aactttgacgagatggcgcgtgacttcaacgccaagtacatgacggcggtggagattctg
gacgacgacacctacctcggcgccgagaacagtcacaacctgtttgtctgtcagaaagac
agtgcggccaccacggacgaggagcgcatgcagatgcaggagatgggccgctaccacgtg
ggcgacatggtcaacgtgttccggcacggctcgctcgtcatgcagggcgtcaccgagaac
atggcgcccacctccggctgcgtgctcttcggcactgtgcagggctcggtcggtctggtg
acccagctggagccggacttctacgccttcatcgcggagctgcagcagcagctgacgcgc
gtgatcaagccggtgggtaagatcgagcacgcggcgtggcgagcctaccgctcggagcgc
aagaccgagccgtgcgagggcttcatcgacggtgacctcatcgagagcttcctcgacctg
aaccgcgaccagatggccgaagtcgtccgggacctgatgatcaccgacgcctcgggccag
cggcggccggccaccgtggacgacattatcaaggcggtggaggagctgacgaggatacac
tga
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integrated database retrieval system
