KEGG   Pollicipes pollicipes (gooseneck barnacle): 119108150
Entry
119108150         CDS       T08250                                 
Name
(RefSeq) helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
ppoi  Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:ppoi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppoi03400]
    119108150
Enzymes [BR:ppoi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     119108150
DNA repair and recombination proteins [BR:ppoi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    119108150
SSDB
Motif
Pfam: POLQ_helical DEAD HTH_61 Helicase_C ResIII HHH_5 Cdd1 DUF4332
Other DBs
NCBI-GeneID: 119108150
NCBI-ProteinID: XP_037087624
LinkDB
Position
Unknown
AA seq 995 aa
MPHYVILRLNPSKCEWMSKELEYFGYRVDCNGIHPTAAKVRAIVEAPQPADFNQLKAYLG
LLMYFSKFMDSPATVAAALYRLVKAGQRWSWGQAESAAFARTKQLLVQAKRWRGPDQDSP
GADVLLNLDSSMTELFNFSPGPGELPDRRSELSAGAADTPGGEPVSPPPDAAPEAADVGP
FHGLPSLVQKLLEKQRGITALYAWQEECLGLPAVRERRNLVYSLPTSGGKTLVAELLIMR
ELLCRRRDCMLVLPYVALVQEKVRALAPFGIALGFLLEEYAGARGAFPPARRRKRRVLYV
CTIEKASGLVTSLLEQSRAEELGLAVIDEVHMLGEPGGRGATLELLVTKLKVAAPQTHLV
SMSATIGNMPDLAAFLEADVYSRPFRPVQLREHVLLDGQLLEVTGSTTDSWEQLLTPRRR
LAFQYSPEQRKRDPDGVGGLVAEVVPANSCLVFCPTRKNCEAVALMICGALGRELGEHQL
DRKKALLAALVNEGSGSVCPTLRQTLRYGVAYHHSGLTTDERKLLEEAYLEGTLCCLCCT
STLAAGVNLPAKRVVLRSPYTGSAFLSRGRYKQMVGRAGRAGIDDSGESILIVAAKDSKL
VGELLMSPLERCVSTLLERDGHGLRRLLLSAVTLGLADSPAALVQVASRSLLAAQADALQ
VDLPAVVRLLRVSRRDGAAGPLPDGDRWAPELQLKVSRLGTAAVKGNVDLRVAGRLYDDL
VHAQSALAVINQLHLLYLVTPYDMMDNIRPAASVYFDLYMSLEPEEVAVARLIGVTEAHV
VRMMSGGGGKATDRTVAHRFYLTLALHDTLRAGSLWTAADRLQLHRGQLQALLQATAAFS
AAVLHFCQQLDEFWPFVQLLDVFNRKLATGCAAELAQLMELPAVKQGRARALFAAGYKSL
SDVANADPEALVRTLDHLPRRVARQMVDSAKMLVLEKAEALQEEAEFMLDGLKSAQFYSS
PGLTEVLLNSSRVESGPEEPTNDPSSPAPTAGVPP
NT seq 2988 nt   +upstreamnt  +downstreamnt
atgccacactacgtcatactacggctgaacccgagcaagtgtgagtggatgtctaaagaa
ttagaatactttggctacagggtcgactgtaacggcatccaccccacagccgcaaaagtg
cgggcaattgtggaggcgccacagcctgctgacttcaaccagctgaaggcatatctcgga
ctgctcatgtacttctccaagttcatggacagcccggccaccgtggcggcggcgctctat
cggctggtgaaggcaggccagcggtggagctggggacaggcggagagcgcggcattcgcg
cgcaccaaacagctgttggtgcaagcgaagcgctggcgcggcccggaccaggacagtccg
ggtgcggacgtcctcctcaacctagacagctccatgaccgagctgttcaacttctcccct
gggccgggagagttgccggaccgccgctcggagctgtcggccggcgccgccgacactcca
ggcggagagcccgtgtctccaccgccggacgccgcgcccgaggcagccgacgtcggcccc
ttccacggtctgccgtcgctcgtgcagaagctgctggaaaagcagcgcggcatcacggct
ctgtacgcatggcaggaggagtgcctgggcctgccggcggtgcgtgagcggcgtaactta
gtgtacagcctgccgaccagcggcggcaagacgctcgtggccgagctgctcatcatgcgc
gagctgctctgccggcgccgcgactgcatgctcgtgctgccgtatgtcgcgctagtccag
gaaaaggtgcgcgccctcgctccgttcggtatagcgctgggtttcctcctggaggagtac
gccggcgcgaggggcgcctttccacccgcccggcggcgcaaacggcgggtgctgtacgtg
tgcacgattgagaaggccagcggcctcgtcaccagcctgctggagcagagccgcgccgag
gagctcggtctggccgtcatcgacgaggtgcacatgctcggcgagcccggcggccgaggc
gccaccctggagctgctcgtcaccaagctgaaggtggccgcgccgcagacccatctggtc
agcatgagcgccaccatcggaaacatgcctgacctggccgccttcctggaggcggacgtt
tactcccggccgtttcggcctgttcagcttcgcgaacacgtgctactggacggccagctg
ctggaggtgaccggctcgacaaccgacagctgggagcagctgctgacgccgcgccgtcgg
ctggcgtttcagtacagcccggagcagcggaagcgggacccggacggcgtgggcggcctg
gtggccgaggtggtgccggccaactcctgcctcgtcttctgtcccacgcgcaagaactgc
gaggccgtggcgctcatgatctgcggcgctctcggcagggagctcggcgagcaccagctg
gaccgcaagaaggcgctgctcgcggcgctggtgaacgaggggagcggctccgtctgtccc
acgctgcgccagacgctccgctacggcgtggcttaccatcactcaggtctgaccacagac
gagcgcaagctgctggaggaggcgtacctggagggcacgctctgctgcctctgctgcacc
tccacactggccgccggcgtcaacctaccggccaagcgggtggtgctgcggtcgccctac
accggctcggcgttcctgagtcgcggccgctacaagcagatggtgggacgcgcaggccgg
gcgggcattgatgactcgggcgagtccatcctcatcgtagctgctaaagactccaaactg
gtgggcgagctgctaatgtctccgctggagcgatgcgtctctacgctgctggagcgggac
ggccacggtttacgccgcttgctgctgtcggccgtgacgctgggactggccgactccccg
gctgccctggtccaggtggccagccgctccctgctggcggcgcaggcggacgcgctgcag
gtggacctgccggcggtggtgcgtctgctgcgcgtgagccggcgggacggcgcggccggc
ccgctgcccgacggcgaccggtgggcgcccgagctgcagctgaaggtcagccgtctgggc
acggccgccgtcaagggtaacgtggacctgcgggtggccggccgcctgtacgacgacctg
gtgcacgcccagtcggcgctggccgtcatcaaccagctgcacctgctgtacctggtcacg
ccttatgacatgatggacaacatccggccagccgccagcgtctactttgacctgtacatg
tcgctggagccggaggaggtggccgtagcccgtctgatcggcgtcaccgaggcgcacgtg
gtccgaatgatgtccggcggcggcggtaaggcgacggaccggacggtggcgcaccggttc
tacctgacgctggcgctgcacgacacgctgcgtgccggctcgctgtggacggccgccgat
cggctgcagctgcaccgcggccagctgcaggcgctgctgcaggccacggccgccttctcg
gccgccgtgctgcacttctgccagcagctggacgagttctggccattcgtgcagctgctg
gacgtcttcaaccgcaagctggccaccggctgtgctgccgagctggcacagctcatggaa
ctccccgccgtgaagcagggccgggcgcgcgcgctgttcgccgccggctacaagtcgctc
tcggacgtggccaacgctgacccggaggcgttggtgcgcacgctggaccacctgccgcgc
cgcgtcgcccgacagatggtggactcggcgaagatgctggtgctggagaaggcggaagcg
ctgcaggaggaggccgagtttatgctggacggcctgaaatcggcccagttctacagttcg
ccggggctgaccgaggttctcctcaactcgtcgcgcgtggagtcgggcccagaggagccg
accaacgacccttcgtcgccggccccgaccgccggtgtgccgccgtag

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