Pollicipes pollicipes (gooseneck barnacle): 119108372
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Entry
119108372 CDS
T08250
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi04140
Autophagy - animal
ppoi04142
Lysosome biogenesis
ppoi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
119108372
04140 Autophagy - animal
119108372
04148 Efferocytosis
119108372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppoi04131
]
119108372
Membrane trafficking [BR:
ppoi04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
119108372
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
zf_RING_Vps8_fungal
zf-RING_Vps41
VPS18_solenoid_2nd
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
TPR_2
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
TPR_7
TPR_17
TPR_1
TPR_8
Beta-prop_WDR5
zf_RING_Vps8
zf-RING_5
TPR_12
Beta-prop_IFT122_1st
Beta-prop_EML_2
Beta-prop_HPS5
Beta-prop_WDR3_2nd
TPR_19
Motif
Other DBs
NCBI-GeneID:
119108372
NCBI-ProteinID:
XP_037087843
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MAEAAPEPGDADSIGEYSGSFDSDSSEEPQDEPHLKYERMGSDLALLLAEEPATCLCVHP
KLVLVGTGPGRVHVFDHLGNRVRPARQPHTLCVNQISADDAGEFVASCSDDGSVCVHGLY
SRDNSHSLAFDAPVKAVALDPGYARAGGGRRFAVGDSRVVLHEKTFLARLRPTVVHEGDG
TVQTLSWRGPLLAWASDGGVRVYHTELRRVISLIRCDPRAATDAAAAAAAHMEITHIFHT
EFLVCGLAACGDELVLLTQSETGAGPRPRPQVRVIRPLPEDYQELSTDELTVRGFQNFSS
NQYRLDCLPDEGAFFVLAPSDVIVARPRDTDDHLDWLLEHGRFEEALHQLQAAGLAVRRH
CLQDVGRKYLDSLLQEERYELAASLCHSIFGRSRALWEEEVYRFAALRQLKAISGYLPRG
DFRLDSTVYEMVLYNFMRTDQDEFLRLVREWSPSLYHCGAVVNAALEQLLHDADNPRLLQ
ALGLLYTHQGRHDKALAIYLKLGHAGVFELVARHGLHAAVADRAAALARVDEARTVELLT
DRPDQAPPERVVADLEAAPATLYRYLWRLHQRHRELSGKYHDRLVELLADYERGRLLEFL
RGSDEYSLQRALHVCQTRSLIGETVYLLGRTGATREALQLIMSQLADIRKAIAFCKEHDD
AELWDDLIAYCLDQPAMVKELLLNIGTHVDPRRLVRRIDNGLAIPGLRDALVQILHDYKV
QLDLQENCRRILVSDCFLLHRDPAKVVDLVVFHCRHGFHRACLPAGRPDCCLVCRNEPRA
GFR
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggcggcccccgagccgggcgacgccgacagcatcggagagtactcgggctca
ttcgactcggactcgtcagaggaaccgcaggacgagccgcatctcaagtacgagcgcatg
gggtcagacctggcgctgctgctagccgaagagccggccacgtgcctctgcgtgcacccc
aagctcgtgctggtcggcacgggcccaggccgcgtgcacgtgtttgaccacttggggaac
cgcgtgcggccggcgcggcagccgcacacgctctgcgtgaaccagatcagcgccgacgac
gccggggagttcgtggcaagctgctccgacgacggctccgtttgcgtgcacggcctgtac
tcgcgcgacaacagccacagcctggcgttcgatgctcccgtcaaggcggtagccctggac
ccagggtacgctcgcgccggcggcggccgccgcttcgccgtcggcgacagccgcgtggtg
ctgcacgaaaagacgttcctggcgcgcctgcggccgaccgtggtgcatgagggcgacggc
acggtgcagacgctgagctggcgcggcccgctgctcgcctgggcgtcggacggcggcgtg
cgcgtgtaccacacagagctgcgccgcgtcatcagcctgatccgctgcgacccgcgcgcc
gccaccgatgccgccgccgccgccgccgcgcacatggagatcacgcacatcttccacacc
gagttcctcgtgtgcgggctggcggcgtgcggcgatgagctggtgttgttgacgcagagc
gagaccggcgcagggccgcggccgcgaccgcaggtgcgcgtcatccgcccactgcctgag
gactaccaggagctctccaccgacgagctgacagtgcgcggcttccagaacttctcgtcc
aaccagtaccggctcgactgcctgccggacgagggtgcattcttcgtgctggcgccgagc
gacgtgatcgtggcgcggccgcgcgacacggacgaccacctcgactggctgctggaacac
ggccgcttcgaggaggcgctgcaccagctgcaggcggccgggctggccgtgcgccggcac
tgcctgcaggacgtcggccgcaagtacctggacagcctgctgcaggaggagcgctatgag
ctggccgcctcgctctgtcactcgatctttggccgtagccgcgcactttgggaggaggag
gtgtaccggttcgcggcgctgcgccagctcaaggccatcagcggctacctgccgcgcggc
gacttcaggctcgactcgaccgtctacgagatggtgctgtacaacttcatgcgcacggac
caggacgagttcctgcggctggtgcgcgagtggtcgccgagcctgtaccactgcggcgcc
gtggtgaacgcggcgctcgagcagctactccacgacgccgacaacccgcgcctgctgcag
gcgctcggcttgctctacacgcaccagggccgccacgacaaggcactcgccatctacctg
aagctgggccacgcgggcgtgttcgagctggtggcgaggcacggcctgcacgcggccgtg
gccgaccgcgcggcggcgctggcgcgcgtcgatgaggcgcgcaccgtcgagctgctcacc
gaccggcccgaccaggcgccgcccgagcgcgtcgtggccgacctggaggcggcgccggcc
acgctctaccgctacctgtggcggctgcaccagcggcaccgcgagttgagcggcaagtac
catgaccgcctggtggagctgctcgcggactacgagcgcggacggctgctcgagttcctg
cgcggcagcgacgagtactcgctgcagcgcgcgctgcacgtgtgccagacacgatcgctg
atcggcgagacggtctacttgctcggccggacaggcgcgacgcgcgaggcgctgcagctc
atcatgagccagctggcggacatccgcaaggccatcgccttctgcaaggagcacgacgac
gccgagctgtgggacgacctgatcgcctactgcctcgaccagccggccatggtgaaggag
ctgctgctcaacattggcacgcacgtggacccgcgtcgcctcgtgcgccgcatcgacaac
ggcctggccatcccgggcctgcgcgacgcgctcgtccagatcctccacgactacaaggtg
cagctggacctgcaggaaaactgccggcgcatcttggtcagcgactgcttcctgctgcac
cgcgatccggccaaggtggtcgacctggtggtgttccactgccgccacggcttccatcgc
gcctgcctgccggccggccggcccgactgctgtctcgtgtgccgcaatgagccgcgcgcg
ggctttcgctga
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integrated database retrieval system
