Pollicipes pollicipes (gooseneck barnacle): 119108395
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Entry
119108395 CDS
T08250
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119108395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119108395
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119108395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
119108395
NCBI-ProteinID:
XP_037087866
LinkDB
All DBs
Position
Unknown
AA seq
258 aa
AA seq
DB search
MASDMRAIQPESLYKLYLECQERPDGRRLDEARPTVLNRGGVGTADGSAYCRAGHTAVLC
GIKAEVCVPAVDAPQDAGWVVPTLELPALCHHRFRPGPPAEAAQTASSQLLQLLDNSVAL
DRRRLCIEPGRAVWVLYCDLVCLSHDGNVLDVALMALSAALADLRLPRAWWDAPAERLRV
APAERAPLPLGPLPLAATLALFDGDTLVLDPAGEEAGGHALSEQAMDQCIALSKRRTLEL
KKLLDVSADAAAEGGVVD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggacatgcgcgcgatccagccggagtccttgtacaagctgtacctggagtgt
caggaacggccagacgggcggcgcctggatgaggcgcggccaacggtgctgaaccgcggc
ggcgtcggcacagccgacggctcggcgtactgccgggccggtcacacggccgtgctgtgt
ggtatcaaggccgaggtgtgcgtgccggccgtggacgcgccgcaggacgccggctgggtg
gtgcccaccctggagctgccggcgctctgccaccaccggttccgaccggggccgccggcc
gaggcggcgcagacggccagcagccagctgctgcagctgctcgacaactcggtcgcgctc
gaccggcggcggctgtgcatcgagcccggtcgcgccgtctgggtgctctactgtgacctg
gtgtgcctcagtcacgacggaaacgtgctggacgtggcgctgatggcgctgtccgcggcg
ctggccgacctgcggctgccgcgcgcctggtgggacgcgccggccgagcggctgcgcgtg
gcacccgccgagcgggcgccgctgccgctcggcccgctgccgctggccgccacgctggct
ctgttcgatggtgacacgctggtgctggacccggccggcgaggaggcgggcggacacgcg
ctctccgagcaggccatggaccagtgcatcgcgctcagcaagcgacgcaccctcgagctg
aagaaactgctggacgtgtcggctgatgcggccgcggagggcggggtcgtcgactaa
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