Pollicipes pollicipes (gooseneck barnacle): 119108525
Help
Entry
119108525 CDS
T08250
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppoi04121
]
119108525
Enzymes [BR:
ppoi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119108525
Ubiquitin system [BR:
ppoi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
119108525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
119108525
NCBI-ProteinID:
XP_037087997
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MDFVILKVNGQDVSRASHEDAVRAFQTAREPIVVEVLRRSADTLQNNANIDAGKLPEEAE
HVTTSTQTELWAWQAPAEFASPPPFADDADDASDHGFDDAGDAHLDFEEVTLHRSLTSER
LGLTLYYPDGNEVDEQTDVLVQSMDVGGIADMDGRVQAGDRIVQINGVDVCSREEAERLL
ASQPDVTLLVCRPAEQAEYDCVLEHVGTEEPNTSPQPTYFERPLDNRVVDTLSAEGNGER
ISQEKRDTMKSGNSVSSTSSGSSGSSSSPTGHQSATLPTMDGELLLVHRQMASIQQECES
LARRQWASRRRQVIDHIYETIPEGTEPDEPLYCQPYEPRPPPVPAPETAPLCRLASWVCV
AAGRTDACQRASATNDRESNSGRQAPPQVAGEPLTLELTLLEGEARRETAPALREVNEQV
RVNPGMYSDVACQRCRTCMRLPPLQPAATKNKNIINSANTVEKNRNFVAFPPQHMSYTNA
AHLQETMRLQHRQLYQRALRQEQDRAKPSTQPITSHFRPLAGSLEQYRYVSSPGGAAQNH
SHTLPADRGLGETQFQYKVKVRSDGSRYIARRPVRKQMLKERAARITEERTGVTTDDDAV
SELKLGRYWPKEEKKRQLVHAREKKMKLQERNQTACFPEDGARDELSLRKRLTAQGSLNA
NFQRRPPTSSRRRNHSEEASKYTKPTLSGGIVLSVTTV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtcattctcaaggtgaacggccaggacgtgtcgcgggccagccacgaggat
gccgtgcgcgccttccagaccgccagggagccgatcgtggtggaggtgctgcggagaagc
gccgacactctacagaacaacgccaacatcgacgccgggaagcttcccgaggaggcggag
cacgtgaccacgtcgacgcagacggagctgtgggcgtggcaagcccctgccgagtttgca
tccccgccgccctttgcggacgatgccgacgacgccagtgaccatggcttcgacgacgcc
ggtgatgcacacctggattttgaggaggtgacactgcataggtcgctgacctcggagcgc
ctcgggctgaccctgtactacccggacgggaacgaggttgacgagcagaccgatgtgctc
gtgcagagcatggatgtgggaggcatcgccgacatggacggtcgtgtccaggccggggat
cgcatcgtccagatcaacggtgtggatgtgtgcagccgggaagaggcggagcgtctgctg
gccagccaaccggacgtcactctgctcgtctgccgacccgccgaacaggcagagtatgac
tgcgttttggaacacgtggggaccgaagaaccgaatacgtctccacaacccacatacttt
gagcgaccgctagataacagggtggtcgacacgttatcggcagaaggcaacggcgaacgg
atctcgcaggagaagcgcgacaccatgaagagtggcaacagtgttagcagcaccagcagc
ggcagtagtggaagcagcagttcgccgacaggccaccagagcgccaccttgccgacaatg
gacggggagctgctgcttgtgcaccggcagatggcgtccatccagcaggagtgcgagtcg
ctggcgcgccgccagtgggcctcgcgccgccgccaggtcattgatcacatctacgagacg
atccccgagggcacggagccggacgagccgttgtactgtcagccgtacgagccgcgaccg
ccgccggtgccggcgccggagacggcaccgctctgtcgcttggccagctgggtgtgtgtc
gccgccggtcgcaccgacgcgtgtcagcgagccagtgctaccaacgacagggagagcaac
agcggcaggcaggcgccgcctcaggtggcgggcgagccgctgacgctcgagctgaccttg
cttgaaggtgaggcgaggcgcgagacggccccggccttgagagaagtgaacgagcaggtg
cgcgtgaatcctggcatgtacagtgacgtcgcctgccaacgctgccgcacatgtatgcgc
ctgccgccgctgcagccggcagcgaccaagaacaaaaacatcattaatagcgccaatacc
gtggagaagaaccgcaactttgtggcgttccctccgcagcacatgagctacacgaacgca
gcgcacttgcaagagacgatgcgcctccagcatcggcagctataccagcgcgctctgcgc
caagaacaggacagagcgaagccgtcaacacagccaataacgtcgcactttcgaccgctc
gccgggtcgctggagcagtatcgctacgtcagctcccctggcggtgccgcgcagaaccac
agtcacacgctaccagccgacagggggctcggagagacgcagttccagtacaaggtgaaa
gtgcgctctgacggctcgcgatacatcgctcgtcgccccgtcaggaagcagatgctgaag
gagagggcggcacgcatcactgaggagcgaaccggcgttaccacagatgacgacgctgtc
tccgagctcaagctgggccgctactggcctaaagaagagaagaagcggcagctggtgcac
gctagggaaaagaagatgaaactgcaggaaagaaaccaaacggcatgcttcccggaggat
ggcgcacgggacgagctaagcttgcgaaaacgactgactgcgcaaggcagcttgaatgca
aactttcagagaagaccccccacttcatcgcggaggaggaaccacagcgaagaggcctcc
aaatacacaaagcctaccctgagcggcggcattgtgctgtccgtgaccaccgtttga
DBGET
integrated database retrieval system
