Pollicipes pollicipes (gooseneck barnacle): 119108588
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Entry
119108588 CDS
T08250
Name
(RefSeq) general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119108588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoi03021
]
119108588
Transcription machinery [BR:
ppoi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
119108588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
DUF3874
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
119108588
NCBI-ProteinID:
XP_037088073
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MSSPGSSSSGVTVQEYSVRVPKVQQKQNCVMQFNSSLLVDFTKWNQVKMVREVPIKEAAG
EEAPKFGAGSEFGKDLREEARRKKLGIVAKKHAPDSYPWLMKVGGKAGKKYRGVRGGSIT
ENASYYVFTQAKDGAFEACPVSEWYNFQHVQRYKALTAEEAEEQFTKRDKIMNYFSVMVK
KRLKNEDDVDEDSEGQKDKKKGGKKKKGEDFKLTDMDEWPDSSEGEEDGSGDEAEDEEDK
KKKKKRDTKEKQKKKKRKSDVKDEAFEDSDDGDDEGREMDYISDSSDSEDDLKPAAEEKG
VDQEDALKRLLDSDAEVEESSEEEKKSDGEDEKKEDEEPQAGEKRKKSKKKKKKKEDEPE
KEEDSGDSDAVDSSDDEKAAAAKAKGDGTGNSSAASSGTTVTKAEKIVNDMKQAADGSNA
PSGGKRSKLESGGMKRKPEDGAGLTSVAKRAKLESVPSPQIASDTGITEEAVRRYLTRKP
MTTTELLQKFKSKKVGLSSDQLVPVIAQILKKINPNKQTIKGKMYLSIKK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtccgggttcgtcgtcctcgggcgtcacagtgcaagagtacagtgtgcgtgtg
ccaaaagtgcagcagaagcagaactgcgtgatgcagttcaacagctcgctgctggtcgac
ttcacaaagtggaaccaggtgaagatggtccgtgaggtgccaatcaaggaggcggctggc
gaggaggccccaaagttcggcgctggcagcgaatttggtaaagatctgcgagaggaggca
agacgtaagaagctgggcattgtggctaagaagcatgcaccggactcatacccgtggctc
atgaaggtgggcggcaaggcgggcaaaaaataccgcggcgtacgcggcggcagcatcaca
gagaacgcgtcctactatgtgttcacgcaagccaaggacggtgccttcgaggcctgcccg
gtctctgagtggtacaacttccagcacgtgcagcgatacaaggcgctcacggctgaggag
gctgaggagcagttcacgaagcgagacaagatcatgaactacttcagcgtcatggtcaag
aaacggctcaagaatgaggatgacgtggacgaggacagcgagggacaaaaggacaagaaa
aagggcggcaagaaaaagaagggcgaagattttaaactgaccgacatggacgagtggccc
gactcctccgagggcgaggaagacggctcgggagacgaggccgaggacgaggaagacaag
aagaagaagaagaagcgtgataccaaagagaaacagaagaagaaaaaacggaaatcggat
gtcaaggacgaggcattcgaggacagtgacgacggcgatgatgagggcagggagatggac
tacatctcggactcttcggacagcgaggacgatctgaagccggcggcggaggaaaagggt
gtggaccaagaggacgcgcttaagcgactgctcgactcggacgccgaggtggaggagtcg
tccgaagaggagaagaaaagcgacggcgaggacgagaaaaaggaggacgaggagccgcag
gccggcgagaagaggaagaagagcaagaaaaagaagaagaaaaaggaggacgagcctgag
aaagaggaggacagcggcgacagcgatgccgtagacagctccgacgacgagaaagcggcg
gcggccaaggccaaaggcgacggtacgggaaacagctctgccgcgtcttccggcaccacc
gtgacgaaagcggaaaagatcgtcaacgacatgaaacaggctgcagatggttccaacgca
ccgtctggcggcaagcggtcaaagctggagtcaggcggcatgaaacggaagccggaggat
ggtgctggcctgacatctgtcgccaagagggcaaagctcgagtctgtgccatctccacaa
atcgccagcgacacgggcatcacggaggaggcagtgcggcggtacctgacgcgcaagccg
atgaccaccaccgagctgctgcagaagttcaagagcaagaaggtgggcctctcctctgac
cagctggtgcccgtcattgcgcagatcctcaagaagatcaaccccaacaagcagaccatc
aagggcaagatgtacctgtccatcaagaagtga
DBGET
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