Pollicipes pollicipes (gooseneck barnacle): 119109027
Help
Entry
119109027 CDS
T08250
Name
(RefSeq) DIS3-like exonuclease 1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119109027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119109027
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
119109027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Motif
Other DBs
NCBI-GeneID:
119109027
NCBI-ProteinID:
XP_037088465
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MLRTSRRINIRSGGRVWQVVREQYLRDDIACQSPLCFEGCAAGAGPTLPRHATCYLVPTD
QVVRHFLDVLQLPEITGIVFTQTALGQVSGPAGKQVQRRVRNIIKTAEKESVFFANEFSS
GAWTKQKSDETFAEWQLRLQYDAAVWYYRHLGGQVAVVVLCGDAGFAHRFGHRQPGVFVQ
TTDQYLAGFWPNLRAARDILDSVQAMLDSAGAESEGCGGSAGSTDYLPAAALQSGLSSGH
MVRGHLTVNKHQPQMEAFVRSASAGARRDASLSDVLVQGAADRNRAVHGDEVVAGEPVPT
GRVVGVLLRGWGEYVATLQLDEEQEGGGGGSSRAGWHLVVPFDRRVPKIRIQTRQADTLK
TQRFVVRIDSWPVSSRYPQGHFVRVLGPIGDLETEIQVILTQNDISPRPFSQAVLSEMPS
AADWSPLPAEVARRRDLRDTHLVFSVDPPGCEDVDDTMSVRRLPSGRLEVGVHIADVTQF
VAAGSATDQEARRRGTTVYLADRRFDMLPAVLSGDLCSLLGGRDRYAVSVIWELDPDSFQ
VHGVWYGRSLIRSRYKMFYEAAQRLVDGTPPVRLVSDVPEWRGLDAETLQQRYRELRDAL
ATLTRLTHHLRHGRQQEGALELESSEVQFEFDEGGANRIQPKQALEIHETVAEMMIFANH
WVAQKIAQTFPQRALLRRHGAARPDQWEPLQRCAATKGWTVRVGSNRQVADSLDACVDPH
DPLVNTLLRLLATRAMVNAEYFSTGSATPEDWGHYGLALDRYTHFTSPIRRYADVIVHRL
LLAAVAAEGSIEQPAGGATEQFSDSELQEVADHLNDRNRAAQHCQMDSQVLFQTMYFVRR
PADDPGNFVDAMIFSLRENGFLVHIPAYALRGPVYLQQKDGQVAWVGDEKVSWESESRVQ
WLNGDVIQNDSDVTVRTELGEQVYRLLDHVTVHIRVLESSAHAHQLRFDLITNEPYWASF
REAALASAGDRSARQLVQEVTASQAARPAEQEQETPDELWSARGTSLYAVLQRHRQRSRD
LKLAPATHRS
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgcaccagccggcgcatcaacatccgcagcggcggccgggtgtggcaggtggtg
cgcgagcagtacctgcgcgacgacatcgcctgtcagagtccgctctgcttcgagggctgc
gcggccggcgccggcccgaccctgccccgccacgccacctgctacctggtgcccaccgac
caggtggtgcgccacttcctggacgtgctccagctgcctgagatcaccggcatcgtgttc
acgcagacggcgctcggtcaggtgtctggacccgccgggaagcaggtgcagcggcgagta
agaaatatcatcaaaacagcggagaaggaaagcgtcttcttcgccaacgagttcagctcc
ggggcctggaccaaacagaagtctgacgagacatttgcagaatggcagttacggctgcag
tacgacgcggccgtgtggtactaccgccacctgggcggccaggtggcggtggtggtgctg
tgcggggacgctgggttcgcgcaccgcttcggccaccggcagccgggcgtgtttgtgcag
acgaccgaccagtacctggccggcttttggccgaacctgcgcgccgcgcgcgacatcctc
gacagcgtgcaggccatgctggactcggccggcgcggagagcgaggggtgcggcggctct
gccggctcgaccgactacctgccggcggcggcgttgcagtcgggcctcagctctggtcac
atggtgcgcggccatctgaccgtcaacaagcaccagccgcagatggaggcgttcgtcagg
agcgccagcgccggcgcgcggagggacgccagcctctcggacgtgctggtccagggtgcg
gccgaccgcaaccgggccgttcacggagacgaggtggtggccggcgagccggtgccgacc
ggccgcgtggtgggcgtgctgctccgcggctggggcgagtacgtggccaccctgcagctg
gacgaggaacaggagggcggcggcggcggcagcagccgggctggctggcacctggtggtg
ccgtttgaccggcgcgttcccaagatccggatccagacccggcaggcggacacgctgaag
acgcagaggtttgtggtacgcatcgactcgtggccagtgagctcccggtacccgcagggc
cacttcgtgcgggtgttggggccgatcggcgacctggagaccgagatccaggtcatcctc
acgcagaacgacatcagcccgcggccgttctcgcaggccgtactgtcggagatgccgtcg
gcggccgactggagcccgttgccggccgaggtggcccgccgtcgtgacctgcgggacacc
cacctcgtgttcagcgttgacccgcccggctgcgaggacgtggacgacaccatgtcggtc
agacggttgccgtccggccgtctggaggtgggcgtgcacatcgccgacgtgacgcagttc
gtggcggccggctcggcgaccgaccaggaggcgcgccgtcggggtaccaccgtctacctg
gccgaccggcgcttcgacatgctgccggccgtgctgagcggcgacctgtgctcgctgctg
ggcggccgcgacaggtacgccgtgagcgtcatctgggagctggacccggactcgttccaa
gtgcacggagtctggtacggccgctctctcatccgctcgcgctacaagatgttctacgag
gcggcgcagcggctggtggacggcacgccgccggtgcgcctcgtgtcggacgtgcctgag
tggcgtggcctggacgccgagacgctccagcagaggtaccgggagctgcgggacgccctg
gcgacgctgacccggctgacccaccacctgcgccacggccgccagcaggagggcgccctg
gagctcgagtcatcagaggtgcagtttgagttcgacgagggcggtgccaaccgcatccag
cccaagcaggcgctggagatccacgagactgtggccgagatgatgatcttcgccaaccac
tgggtggcgcagaagatcgcgcagacgttcccgcagcgcgccctgctcagacgtcacggc
gcggcgcggccggaccagtgggagccgctgcagcgctgcgccgccaccaagggctggacg
gtccgcgtcggctccaaccgacaggtggccgactccctggacgcctgcgtcgacccgcac
gacccgctggtcaacacgctgctgcggctgctagccacgcgcgccatggtcaacgccgag
tacttctccaccggttcggcgacgcccgaggactggggtcactacggcctggcgctggac
cgctacacgcacttcacctcgcccatccgccgctacgccgatgtcatcgtgcaccggctg
ctgctcgccgccgtcgcggcagagggcagcattgagcagccggcaggcggcgccaccgag
cagttctccgactccgagctacaagaggtcgccgaccacctcaacgaccgaaaccgggcg
gcgcagcactgccagatggactcgcaggtgctcttccagaccatgtacttcgtgcgccgg
ccggccgacgacccgggcaacttcgtggacgccatgatcttctccctgcgggagaacggc
tttctcgtgcacataccggcctacgctctgcgaggccccgtatacctgcagcagaaggac
ggccaggtggcctgggtcggagatgagaaggtcagctgggagtcggagtcgcgggtccag
tggctgaacggtgatgtcatccagaacgatagtgacgtcactgtgcggaccgagcttggc
gagcaggtgtaccgcctgctggaccacgtgacagtgcacatccgcgtgctcgagtcgtcg
gcgcacgcgcaccagctgcgctttgacctcatcaccaacgagccgtactgggcgagcttc
cgcgaggcggcgctggcgtcggccggcgaccgcagcgcgcgccagctggtgcaggaggtg
acagcgagccaggcggcgcggcctgccgaacaggagcaggagacgcccgacgagctctgg
tcggcccgtggcaccagcctgtacgccgtcctgcagcggcaccgccagcgcagccgagac
ctgaagctcgccccagctacacaccggagctga
DBGET
integrated database retrieval system
