Pollicipes pollicipes (gooseneck barnacle): 119109288
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Entry
119109288 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi04512
ECM-receptor interaction
ppoi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119109288
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119109288
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppoi04147
]
119109288
00536 Glycosaminoglycan binding proteins [BR:
ppoi00536
]
119109288
Exosome [BR:
ppoi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
119109288
Glycosaminoglycan binding proteins [BR:
ppoi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119109288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Extensin_1
Motif
Other DBs
NCBI-GeneID:
119109288
NCBI-ProteinID:
XP_037088780
LinkDB
All DBs
Position
Unknown
AA seq
1201 aa
AA seq
DB search
MAAPGRAARRLPLVPCLVVLLGLLRLSDAAACKGCVVQNCICEGEKGYVGNPGIPGLQGS
QGFPGDMGPEGPIGPLGMKGSRGEEGAQGAKGDRGGPGVHGFTGAPGILGLPGDIGNRGA
GGFPGCNGTDGERGLPGLPGLSGPRGQPGAAGLRGPRGDPGDGGVNSIGIKGAVGDSGRP
GIDGLPGLEGPKGYRGYPGDSGERGPEGLPGLPGPKGEQGIQKVGPPGPKGEQGDQGPTG
PGSPDGGFTSAEEERDFAGPKGYVGPKGSQGDKGPAGRRGEDGKSGAPGPPGNKGVRGLR
GDEGRHGKQGRPGPPGGYGNKGAKGAPGYTGLDGTPGRLGARGEPGFGGQPGPQGDVGPK
GFYDPVIAEAMKGSRGVQGDPGPVGPKGESGLPGREGALGFPGYPGRPGPDGPTGPRGRP
GIVINGDQGDDGLSGPPGPFGPTGPIGQPGFPGLPGSPGLSVTGPPGQDGIPGRPALDGM
PGERGDPGFAGRKGSARHRRAQNGSPGRTGTAGSSRPAGINRPGGHPRSAGRQGRQWRFS
PCQKGEAGDTGRPGLVGVQGPGEYGDQGPPGPDGVDGLAGRPGLDADRSLLPQLVGDKGL
EGFRGQIGEEGDEGLVGEPGDSNLPVRIGETGEDGDVGRPGLPGLKGQPGFAGDPGVPGL
RGLPGFPGRSLRGADGLKGYPGLSGDGARGPPGDSIPGRPGLPGFTGQRGLPGLFGFPGL
KGADGLPGGGGPGRPGQEGPKGDRGDDILQPGPAGPKGFSGRPGFPGPPGDQGDEGLQGA
PGLDGLPGALGDGVEGQPGLPGQRGEPGRPGTFGQTGFKGLPGPAGQAGFPGLPGLKGFP
GDLAAFGLKGGRGDPGPDGPPGRPGARGRMGKPGPDGLPGLQGDEGRSGRAGRPGAAGFK
GMVGVPGRDGNPGVSGPVGRVGAPGEPASAGPPPRPRGFHFTRHSQTASLPQCPPGSVRL
WDGFSLLHVTGNSKAHGADLGTPGSCMRKFSTMPYLFCNINNQCEYAQRNDYSYWLSTPE
PMPMMMTPIRGNEIQPYISRCSVCESDTLVIAIHSQSMDVPECPRNWESIWIGYSFLMHT
DAGAEGGGQSLVSPGSCLEDFRPTPFIECHGHGRCNYFTTAFSYWLATIEEPMQFRKPEQ
QTLKAGSLRTRVSRCAVCRRRKDSARRPSFERAPFERPSLERAPFQRAPFERPPFERPEA
Q
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccgggcagggcggcgcgccgcctgccgctggtgccctgcttggtcgtgctg
ctaggactcttgcgtctttcggatgcggcggcatgcaaaggctgcgtggtccagaactgc
atctgcgagggcgagaagggctacgtgggcaaccctggcatcccgggcctgcagggctcg
cagggcttcccgggcgacatggggcctgagggcccgatcggcccgctcggcatgaagggc
tcgcgcggcgaggagggcgcccagggcgcgaaaggagaccgcggtggcccgggagtgcac
ggcttcactggagcgcccggcattctgggtctgcccggtgacatcggtaaccgtggagcc
gggggcttccccggctgcaacggcacggacggcgagaggggcctgcccggcctgccgggc
ctcagcgggccgcggggccagccaggcgctgctggactgcgtggcccgcggggtgacccc
ggcgacggcggcgtcaactcgatcggcatcaagggcgcggttggcgacagcggacggccc
ggcatcgatggacttccaggtctagaaggacccaaaggatacagaggataccctggtgat
agcggagaacgcggcccagagggactgccgggtcttcctggcccaaagggagagcaaggc
atccaaaaggtgggcccgccgggcccgaagggcgagcagggagaccagggtcccactggg
cccggatctccggacggcggcttcacctcagcagaggaggagcgagacttcgccggaccc
aagggctacgtgggcccgaagggctcgcagggcgataagggtccggccggccggcgcggt
gaggacggcaaatccggtgcgcccggcccgcccggcaacaagggcgtgcgcggcctgcgt
ggtgacgagggccgccacggcaagcaggggcgacctggcccaccaggcggctacggcaac
aagggtgccaagggcgcgcctggctacaccggcctggacggcacgccggggcggctgggc
gcgcgtggcgagcccggcttcggaggccagcccggaccgcagggcgacgtcggccccaag
ggcttctacgacccggtgatcgctgaggcgatgaagggctcgcgtggtgtgcagggcgac
cccggcccggtggggcccaagggcgagagcggcctgccaggccgcgagggcgcgctcggc
ttccccgggtaccccggccggccgggcccggacgggccgacgggaccacgcggccgaccg
ggcatcgtcatcaacggcgaccagggcgacgacggtctgtccggtccgccgggcccgttc
ggcccgacgggcccgatcggccagcccggcttcccgggcctgccgggctcgccgggcctg
agcgtgaccgggccgcccggccaggacggcatccccggtcggccggcgctcgacggcatg
cccggcgagcgtggagaccccggcttcgcaggccggaaagggtcagcccggcatcggcgt
gctcaaaacgggtcccccgggcgaaccgggacggccgggagttcccggccggccgggatc
aaccggcccggagggcatcccaggagtgccgggcgtcaagggcgccagtggcgattctca
ccgtgccagaagggagaagccggcgacacgggccggcccggcctggtgggcgtgcagggc
ccaggcgagtacggtgaccaagggccgcctggtccggatggtgtggacggcttggcgggc
cggcccggcctggacgccgaccgcagcctcctgccgcagctagtcggagacaagggctta
gagggtttccgcggtcagatcggagaggagggcgacgagggcctagtcggcgagcccggc
gactccaacctgccagtgcgcatcggcgaaacgggcgaggacggcgacgtcggccggcct
ggtttgccggggctgaagggtcagccagggttcgccggcgacccaggcgtgcccggcctg
cgcggcctgcccggcttccctggccgatccctgcgcggcgcggacggcctcaagggctac
ccgggcctcagtggcgacggggcgcgagggccgccgggtgactccatccccggccggccc
ggtctgccaggcttcacgggccagcggggtctgcccggcctcttcggcttccccggcctg
aagggcgcggacggcctgcccggcggaggcgggcccggccggcccggccaggaggggccc
aagggggacagaggcgacgacattctgcagccaggcccggccggcccgaagggcttctcg
ggccgccccggcttcccgggacctccgggtgaccagggcgacgagggcctgcagggtgcg
cctggcctagacggcctgccgggcgcgctcggagacggcgtcgagggccagccgggcctg
cctggccagaggggagaacctggcaggccgggcaccttcgggcagaccgggttcaagggc
ctgcccggcccagcgggccaggccggcttccccggcttgcccggcctcaagggattcccc
ggagacctagccgcattcggtctgaagggcggccgcggcgatccaggcccggacggcccg
ccgggtcggccgggcgcgcgcggtcgcatgggcaagccgggccccgacggcctgccgggc
ctgcagggcgacgagggccgcagcggcagggccggccggcccggcgccgccggcttcaag
ggcatggtgggcgtgccgggccgcgacggcaacccgggcgtgtcgggcccagtcggccgg
gtcggcgcccccggcgagccggcatcggcgggcccgccgccgcggccgcgtggcttccac
ttcacccgccacagccagacggcgtcgctgccgcagtgtccgcccggctcggtacgcctc
tgggacggcttctcgctgctgcacgtcaccggcaactccaaggcccacggcgccgacctc
ggcaccccagggtcctgcatgcgcaaattctccaccatgccgtacctgttctgcaacatc
aacaaccagtgcgagtacgctcagcgcaacgactacagctactggctgagcacgccggag
ccgatgcccatgatgatgacaccgatccgggggaacgaaatccagccgtacatctcgagg
tgttcggtgtgcgagtcagacaccctggtgatagccatccacagccagagcatggacgtg
ccggagtgtccgcggaactgggagagcatatggatcggctactccttcctcatgcacacg
gacgcgggcgccgaaggcggcggccagtcgctcgtctctcccggctcctgcctggaggac
ttccgacccacgcccttcatcgaatgccacggccacggtcgctgcaactacttcaccacc
gccttctcctactggctggccaccatcgaggagccaatgcagttccggaagcccgagcag
cagacgctgaaggcgggcagcctacgcacgcgcgtctcgcgctgcgccgtctgccgccgg
cggaaggacagcgctcggcggccatcgttcgagagggcgcccttcgagaggccgtcgctc
gagagggcgccgttccagagggcgccgttcgagaggccgccgttcgagcggcccgaggcg
cagtag
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