Pollicipes pollicipes (gooseneck barnacle): 119109867
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Entry
119109867 CDS
T08250
Name
(RefSeq) X-ray repair cross-complementing protein 5-like
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
119109867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppoi03400
]
119109867
DNA repair and recombination proteins [BR:
ppoi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
119109867
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Motif
Other DBs
NCBI-GeneID:
119109867
NCBI-ProteinID:
XP_037089514
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MEALVLVVDVGASTGVQPPDGRPSFLETALRCCDRVVQRKLFSAPKDHVALVLIGSDATD
NALADGDQYQHVSLARRLAPADWQLVHLLQDELHASAAQGDWLDGLVVALDHLEASGRVH
KYAERRLVLLTDFAGPLCADQLDAIAAGLRRLEVDLTVIGVELSDAAPVDAAGGGGDEPR
AGPSRPPGSLRHDGKPKTQRQLDGEAVAARLIDSLDCDFHAFEQALPQLLFFRKRATRAA
PWNAPLQIGDNLTIPITGYSQVRKATPPSWKKLTVDEQPEAVRQRKLYELQDDERTVVPV
EDTLRAFSYGTTLVPFSADDEKRLKYSSGAPCSLQVLGFTAAANVHPYQFLGTQTVQIVA
RRDDAAAETALSALIHALLETDMVAITRRTYRAGLMPLLGALLPLIHHSFECLVFVQLPF
CEDVRGPLFEPLPETFGDGQLAAVDQLLDAMDLTAPAARPVAERLAPGALIGTVSPVDDF
VTLLGRDDVQFDELCAQMQRVIASLVREVMLRPMLLDKTLSAIVCLRQHCCRIAPLAYNT
WRLGPITVSESVHPAGTDEEAEQFYRSVQAEQAAPADVDMAEDLLDDL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggaggctctggtgctggtggtggacgtcggcgcgtcgaccggcgtgcagccgccggac
ggccggccctccttcctggagacggcgctgcgctgctgtgaccgcgttgtgcagcgcaag
ctcttctccgccccgaaagaccacgtggcgctggtgttgatcggctcggacgccacggac
aatgcgctggctgacggcgatcagtaccagcacgtgagcctggcgcgccggctggcgcct
gctgactggcagctggtacacctgctgcaggacgagctgcacgcatcggccgcgcagggc
gactggctggacggcctggtggtggcgctggaccacctggaggcgtccgggcgcgtgcac
aagtacgccgagcgacggctggtgcttctgaccgactttgctggtccgctgtgtgccgac
caactggacgcgatcgcggccggcctgcgccgcctggaagtcgacctgaccgtcatcgga
gtcgagctttcagacgcggcccctgtcgacgcggccggcggcggcggcgacgagccacgc
gctgggccgtcccggccgcccggctcgctccggcacgacggcaagcccaagacgcagcgt
cagctggacggagaggcggtggcggcgcggctcatcgacagcctcgactgcgacttccac
gccttcgagcaggcgctgccacagctgctcttctttcggaagcgggcgacgcgcgcggcg
ccctggaacgcgccactgcagatcggagacaacctcaccattcccatcactggctacagc
caggtgcgcaaggcaacgccgccgtcctggaagaagctgacggtggacgagcagccagag
gctgtgcgccagcgtaagctgtacgagctgcaggacgacgagcgcaccgtcgtccctgta
gaggacacgctgcgcgccttcagctacggcacgacgctggtgccgttctcggcggatgac
gagaagaggctcaagtacagcagcggcgcgccctgctcgctgcaggtgctcggcttcacg
gccgctgccaacgtacacccgtaccagtttctgggcacccagacggtccagatcgtggca
cgccgcgacgacgcggcggctgagacggcgctctcggcgctcattcacgcccttctggag
acagacatggtggccatcacgcggcgcacctaccgcgccggcctgatgccgctgctgggc
gctctgctgccgctcatccaccactccttcgagtgcctcgttttcgtgcaacttccgttc
tgcgaggacgtgcgcggcccgctgttcgagccgctgccggagacgttcggcgacggtcag
ctggcagctgtcgaccagctgctcgacgccatggacctgacggcgccggcggcgcggcct
gtcgccgagcggctcgcgcccggcgccttgatcggcaccgtcagcccggtcgacgacttc
gtgacgctgctgggccgcgacgacgtacagttcgacgagctgtgcgcgcagatgcagcgc
gtgatcgcgagcttggtgcgcgaggtgatgcttcggccaatgctgctggacaagacgctg
tctgctatcgtctgcctgcgtcagcactgctgccgtatcgcgccgctcgcctacaacacg
tggcgactcgggccgatcacggtgagcgagagcgtccacccggccggcaccgatgaagag
gccgagcagttctaccgcagcgttcaggcggaacaggctgcgccggccgacgtcgacatg
gcggaggatctactggatgacctgtga
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