Pollicipes pollicipes (gooseneck barnacle): 119110045
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Entry
119110045 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119110045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119110045
03012 Translation factors [BR:
ppoi03012
]
119110045
Enzymes [BR:
ppoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119110045
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
119110045
Translation factors [BR:
ppoi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119110045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
AAA_16
AAA_11
AAA_30
PhoH
Myosin_head
AAA_23
ABC_tran
AAA_7
Motif
Other DBs
NCBI-GeneID:
119110045
NCBI-ProteinID:
XP_037089684
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MVADEQTGPPEDPAVGRLDPSLADKYRHLTNCSFKQEFLANLLGNQDRDWDNLSYDPERD
GLRRVPEIDRELLEQSGRAGPLDAFRRALPAFQQREHILQLVAENQVVVISGETGCGKTT
QVVQYLLEEAAAAGRGSLCHVVCTQPRRISAVTVAERVARERGTSASASGGGQVGYAIRL
DHRHPRPHGSVLFCTTGVLLQRLQTDPVLARVSHLVVDEVHERDSLADFLVTIVKGLLPV
RPDLKVILMSATINSAEFSAYFADCPTAHIPGRAFPVHALYLEDVLQLTGFQFPPRDGAQ
GGRRPWRRRFPDQAEREMEFRQIIDPYTRQLAAEGRYSPAALSALAHPDSEQFEPELYVA
LLRHICRHEPEQGAVLVFLSGWDEIGKVHKALSGDPVLGDGESERFLILPLHSMMPTIEQ
REVFERPPPGRRKIIIATNIAETSITIDDVVFVIDGGKVKMKNVDKNTGCMTLMPEWVSK
ANSRQRRGRAGRVQPGKCYHLYSRAREATLPDYPVPEILRTRLEELCLQIKILRLGAVAP
FLERAMDKPSATAVDLSLQMLRRLRALDEREHLTPLGFHLAKLPLDPQTGKMLIMAAMFS
CLDPILTVAACLSFKEPFVVPLGSEQQADLARHRLSEGLLSDHMTMVNAFNLWTAARDRP
TFARRNFLSGSTLEMIRATRQQFLEHLHKLRFVSNTQAREPALNENSYNLGVIRAVISAG
LYPNVLYARKTRSRVLCSSPEGRVSLHPKCVISRAPSLPGHWLVYKLKIKSASVTVHDCS
LVSPYQLLLFGERLDLLEPETTDELPLIAADAFVRFRCPRQTARLIQGLRSELDTIIGLR
LSDPKQTDWAKPSHETDVLRLIVELVTSDDIAPAWGGADRPMPTWEDGGQLDGGAGSSWR
TGGRSEGGAGAGSSWRTTGRSDGDTGSSWRSGGRPDSDTGSSWRDGRATKHRRPAGAHDA
QPWGRGGH
NT seq
2905 nt
NT seq
+upstream
nt +downstream
nt
atggtggccgacgagcagacgggacccccagaggaccccgccgtcggccgactggatccc
agcctggccgacaagtaccggcacctcaccaactgcagcttcaagcaagagttcctggcc
aacctcctgggcaaccaggaccgcgactgggacaacctcagctacgacccggagcgggac
gggcttcggcgcgtgccggagatagaccgcgagctgctggagcagagcggccgcgccgga
ccgctggacgccttccggcgcgcgctgccagccttccagcagcgcgagcatatcctgcag
ctggtggccgagaatcaggtcgtggtcatcagtggcgagacaggctgtggcaagaccacc
caggtggtgcagtacctgctggaggaggcggcggcggccgggcgcggctcgctctgccac
gtggtctgcacgcagccgcgccgcatctcggccgtaacggtggccgagcgcgtggcccgc
gagcgcggcaccagcgccagcgcctctggcggcggacaagtgggctacgccattcgactc
gaccaccgccacccgcggccgcacggctccgtgctgttctgcaccaccggcgtgctgctg
cagcggctgcagacggatccggtgctggcgcgcgtctctcacctggtggtggacgaggtt
cacgagcgcgactcgctcgcagacttcctcgtcacaatcgtcaagggcctgctgccggtg
cggcccgatctcaaggtcatactcatgagcgccaccatcaactcggccgagttctcggcc
tacttcgccgactgcccgacggcccacatccctggccgggcgttccccgtgcacgcgctc
tacctggaggacgtgctgcagctgaccgggttccagtttccgccgagagatggcgctcag
ggcggccgtcgcccgtggcggcggaggtttcctgaccaggcggagcgggagatggagttc
cgacagatcatcgacccctacaccaggcagctggcggcggagggccgctacagtccggcg
gcgctctccgccctggcgcaccccgactcggagcagttcgagccggagctgtacgtggcg
ctgctgcgtcacatctgccgccacgagccggagcaaggcgccgtgctcgtctttctctcc
ggctgggacgagatcggcaaggtgcacaaggcgttgagcggcgaccccgtgctcggagac
ggtgagtccgagcgcttcctgatcctgccgctgcactcgatgatgccgacgatcgagcag
cgtgaggtgttcgagcgcccgccgcccggccggcgcaagatcatcatcgccaccaacatc
gccgagacgtccatcaccatcgacgacgtggtgttcgtcatcgacggcggcaaggtcaag
atgaagaacgtcgacaagaacactggctgcatgacgctgatgccggagtgggtgagcaag
gctaactcccggcagcgccgcggcagagctggacgggtgcagccgggcaagtgttaccac
ctgtactcgcgggcgcgcgaggccacgctgcccgactacccggtgccggagatcctgcgc
acgcggctggaggagctctgcctccagatcaagatcctgcggctgggcgccgtggcgccc
ttcctcgagcgcgccatggacaagccgtcggccaccgccgtcgatctctcgctgcaaatg
ctgcgccgcctgcgggcgctggacgagcgggagcacctgacgccgctgggcttccacctg
gccaagctgccgctggacccgcagacgggcaagatgctcatcatggcggccatgttctcg
tgcctggacccgatcctgacggtggccgcctgcctcagcttcaaggagccgttcgtcgtg
ccgctgggctcggagcagcaagccgatttggcgcgccaccgcctctccgagggtctgctc
agcgaccacatgaccatggtgaatgccttcaacctgtggacggcggcgcgcgaccgaccg
acgttcgcgcggcgcaacttcctctctggcagcacgctcgagatgatcagggccacgcgg
caacagttcctggagcacctgcacaagctgcggttcgtcagcaacacccaggcccgtgag
ccggccctcaacgagaactcgtacaacctgggcgtgatccgggcggtgatcagcgccggc
ctctaccccaacgtcctgtacgccaggaagacgcggtctcgcgtgctgtgctcgtcgccc
gagggacgagtcagcctgcaccccaagtgcgtcatcagcagggcgcccagcctgcccggc
cactggctcgtctacaagctcaagatcaagagtgccagcgtgacggtccacgactgctcg
ctggtgtcgccgtaccagctgctgctgttcggcgagcgtctggacctgctggagccggag
acgaccgacgagctgcccctcatcgcggccgacgctttcgtccgcttcaggtgcccccgg
cagacggcccggctgatccaggggctgcgctcagagctggacaccatcatcgggcttcgg
ctgtccgaccccaagcagacagactgggccaagccttcgcacgagacggacgtgctcagg
ctgatcgtcgagctcgtcacgagtgacgacattgcgccggcctggggcggcgccgaccgg
ccgatgccgacctgggaagacggtgggcagctggacggtggcgccggcagctcgtggagg
acaggagggcggtcggaaggcggcgccggcgccggcagctcgtggaggaccacaggacgg
tcggacggcgacaccggcagctcgtggaggagcggaggacggccggacagcgacaccggc
agctcgtggagggacggccgcgctacgaagcaccggcggccggccggcgcgcacgacgcc
cagccgtggggccgcggcggacact
DBGET
integrated database retrieval system
