Pollicipes pollicipes (gooseneck barnacle): 119110588
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Entry
119110588 CDS
T08250
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03040
Spliceosome
ppoi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119110588
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119110588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppoi03041
]
119110588
04121 Ubiquitin system [BR:
ppoi04121
]
119110588
03400 DNA repair and recombination proteins [BR:
ppoi03400
]
119110588
Enzymes [BR:
ppoi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119110588
Spliceosome [BR:
ppoi03041
]
Complex B
Other components
Prp19 complex
119110588
Complex C
Prp19-CDC5 complex
119110588
Ubiquitin system [BR:
ppoi04121
]
Ubiquitin ligases (E3)
U-box type E3
119110588
DNA repair and recombination proteins [BR:
ppoi03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
119110588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Prp19
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
PEP5_VPS11_N
Beta-prop_IFT122_1st
U-box
PROPPIN
Beta-prop_DCAF4
Beta-prop_SPT8
B-prop_COPA_B_2nd
RMC1_N
PUMA_CC
Herpes_UL25
Motif
Other DBs
NCBI-GeneID:
119110588
NCBI-ProteinID:
XP_037090363
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MALVCAISNEAPEHPCVSPVSGAVFERRLIEKYITDNGVDPVANKPLTTDELIDIKVSPL
VKPKAPSATSIPAILKSLQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGVPAAAAAAAAAAAAAAQPPQAAPAETGAKAELPQQEAGMTP
EVIKQLQDKATVLTQERKKRGKTVPEELVTQETLRTYRTVSSNPGLHSASVPGILSLDVH
QEDTSKIVTAGSDRNCTVFNKDTEQVVCILKGHAKKVTKVIYHPEEDTVLSASPDATIRV
WNVPTAQTVQLIRAHEGPVTGLSLHATGDYVLSCSSDEHWAFTDLRSGRVLTKVADNSSS
GFTTAQFHPDGLIFGTGTSKSFIKIWDLKERSNVANFPSHSGPITAISFSENGYYLATST
DDSSVKLWDLRKLKNFKTIQLEDGYEVKDLCFDQSGTYLAVAGTDVRVYMCKQWQELVTF
TDHTALATGVRFGQHGSYIASASMDRTLKVYSI
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggtctgtgccatcagcaatgaggcacccgagcacccatgcgtctcgcccgtg
tcgggtgccgtgttcgaacggcgactcatcgagaagtacatcactgacaatggcgtcgac
ccggtcgccaacaaaccactcacgactgacgagctgatcgacatcaaagtgtcgccgctg
gtgaagccgaaggcaccctccgccaccagcatcccggccatcctgaagtcgctgcaggac
gagtgggacgccgtgatgttgcacagcttcacgctgcgccagcagctgcagacggcgcgt
caggagctgagccacgcgctctaccagcacgatgccgcgtgtcgcgtcatcgctcgcctc
accaaggaggtgacggccgcgcgtgaggcgctcgccacgctcaagccgcaggcgggcgtg
ccggcggcggcggcggctgcggctgcggctgcggctgctgccgcccagccgccgcaggcg
gcaccggccgagacgggcgccaaggcggagctgccacagcaggaggccggcatgacgccc
gaggtgatcaagcagttgcaggacaaggccaccgtgctgacgcaggagcgcaagaagcgt
ggcaaaacggtgcccgaggagctggtgacgcaagagacgctgcgcacgtaccgcaccgtc
agctccaacccgggtctgcacagtgcctcggtgccgggcatcctgtcgctggacgtgcat
caggaggacacgagcaagatcgtgacggccggcagcgaccgcaactgcaccgtcttcaac
aaggacaccgaacaggtggtctgcatcctcaagggccacgccaagaaggtcaccaaggtc
atctaccacccggaggaggacacggtgctgagcgcctcgccggacgccactatccgcgtg
tggaatgtgccgacggcgcagacggtgcagctgatccgcgcgcacgagggtcctgtcacc
ggcctgtcgctgcacgccaccggcgactacgtgctcagctgctccagcgacgagcactgg
gccttcaccgacctgcgctcaggccgcgtgctcacaaaggtggccgacaacagctcgtca
ggcttcaccacggctcagttccaccccgacggcctcatcttcggtacgggcacatccaag
tccttcatcaagatctgggatctcaaagagcgcagcaacgtcgcgaacttccccagtcat
tcggggccgatcacggccatctcattctcggagaacggctactacctggccacttccacc
gacgactcctccgtcaagctgtgggatctgcgcaagctgaagaacttcaagaccatccag
ctggaagacggctacgaggtgaaggacctctgcttcgaccagagcggcacgtacctagcc
gtggccggcaccgacgtcagggtgtacatgtgcaagcagtggcaggagctggtgaccttc
accgaccacacggcgctggcgacgggcgtccggttcggtcagcacggctcgtacatcgcc
tcggccagcatggaccgcacgctcaaggtgtactccatctaa
DBGET
integrated database retrieval system
