Pollicipes pollicipes (gooseneck barnacle): 119111109
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Entry
119111109 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppoi03041
]
119111109
03036 Chromosome and associated proteins [BR:
ppoi03036
]
119111109
Spliceosome [BR:
ppoi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
119111109
Chromosome and associated proteins [BR:
ppoi03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
119111109
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Suf
Lsm_interact
RRM_7
HAT_Syf1_CNRKL1_C
LSM_int_assoc
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
119111109
NCBI-ProteinID:
XP_037090831
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
METDEDRERLLALCDRAVREYSSVDLWLEYCQLAIGGLAAEDGPARVRALFERALIAVGL
HVTKGTLIWEAYREFENAMCSGVPPGEESAAAAARDRVTALFRRQLRVPLQGLELTWAEY
EAWLAAAPTAAQPDANDRREYDKACKRLETLLPFEEALTSDETGGSVAAYQQYLSHELAH
GTPARVQHVLERAVLDNCLALELWQAYTRYLDFDHERAVRHLAWSAELWEHYIRAVERAG
APLQRAEELVTRALSSGLQTPADYQLVWLTWLDLYRRRLSQDGTKGADLMEKMRVQFNKA
CEHLAQTFGLEGDPECTLLQYWASLEAANGLLSEAVALWNDIMSQGHDKSARMWLQYLRL
VQRFGTPEQLRKLLVRALDRTVDWPESVYEMWAAFERERGTLQTWDEMTYRNAGGGEALQ
MPPPSPGFKPPPPPGFKPPPPPGFKPPPPPSETREDERRDRPPKGDEGGGTGDVERDSRT
VFLSNLDFATDEARLRSHLADVGDITDVRLVKDYKGRSKGFAYLEFSTIAAAEAAFTARP
SSHRRSPSSASNTTTGLERNKLFVRGLPFSATADDLRQKFSTFGELKDVRLVTXRNGHSK
GLAYIEFNEEVSMPRTAHGRQRAAAEALLKTDSTVMDGKTISVAISDPPKAKGRPTEQRS
LGPGGRGGASRGRLQVAFVPRALQKKEAPAESAAPQAPTPKSNADFRGLLLSKK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggagacggacgaggatcgcgagcggctgctggcgctctgcgaccgagcagttcgcgag
tactccagtgtggacctgtggctggagtactgtcagctggcgatcggcggtctggccgcc
gaggacgggccggcccgcgtgcgcgccttattcgagcgcgcgctcatcgcggtcggcctg
cacgtcaccaagggcaccctcatctgggaggcgtacagagagttcgagaatgccatgtgc
agcggcgtgccgcctggcgaggagagcgcggcggcggcggcgcgcgaccgggtgacggcg
ctgttccggcgccagctgcgcgtgccgctgcaggggctcgagctcacgtgggccgagtac
gaggcatggctagccgccgctcccaccgccgcccagccggacgccaacgaccggcgcgag
tacgacaaggcctgcaagcggctggagacgctgctgccgttcgaggaggcgctgacgagc
gacgagactggcggctcggtggccgcctaccagcagtacctgagccacgagctggcgcac
ggcacaccggcgcgcgtgcagcacgtgctggagcgcgccgtgctcgacaactgcctggcg
ctggagctgtggcaggcgtacacgcgctacctggacttcgaccacgagcgggccgtgcgc
cacctggcctggtcggccgagctctgggagcactacatccgtgctgtcgagcgggccggc
gcgcccctccagcgagcagaggagctggtgacgagggcgctgtccagcgggctgcagacg
ccggccgactaccagctggtgtggctgacctggctggacctgtaccgccgccggctcagc
caggacggcaccaagggcgccgatctcatggagaagatgcgggtccagttcaacaaggcg
tgcgagcaccttgcgcagacgttcggtctggagggcgaccccgaatgtacgctgctgcag
tactgggccagcctggaggcggccaacggcctgctgagcgaggccgtcgccctctggaac
gacatcatgagccagggacacgacaagtcggccaggatgtggctccagtacctgcggctc
gtccagcggttcgggacgccggagcagctgcgcaaactgctggtgcgcgcgctggaccgc
accgtggactggccagagagcgtgtacgagatgtgggcggcgttcgagcgcgagcggggt
accctgcagacctgggacgagatgacctaccggaacgccggaggtggtgaagcactgcaa
atgccgcctccgtcgcccggcttcaaaccgcccccgccgcccgggtttaaaccaccccca
ccgcctggctttaaaccgccgccgccgccgagcgagacgcgggaggacgagcggcgggac
cgaccgccaaaaggtgacgagggcggcggcacgggcgacgtggagcgagactcgcgcacc
gtgttcctcagcaacctggacttcgccacggacgaggcgcgcctgcgcagtcacctggcc
gacgtgggagacatcaccgatgtgcgcctggtcaaagactacaagggccgctccaagggg
ttcgcttacctcgagttctcgaccattgcggcggccgaggcggcgtttacagcgcgaccg
agctcccatcgacgcagccccagcagtgcttcaaatacaaccaccggcctggagcgtaac
aagctgttcgttcgaggcctgccgttcagcgccaccgcagacgacctacggcaaaagttc
tccacgttcggcgagctgaaggacgtgcggctggtcaccntcagaaacggccactctaag
gggcttgcctacatcgagttcaacgaggaggtgagcatgcctcggaccgctcacggtcgg
cagcgggccgcggccgaggcgctgctcaagaccgacagcaccgtcatggacggcaagacc
atcagcgtggccatcagcgatcctcccaaggccaagggccggccgacagagcagcgctcg
ctggggccgggcggccgcggcggcgccagtcgcggacggcttcaggtcgccttcgtgccc
cgagcactgcagaaaaaggaggcgccggccgagtcggccgcgccccaggcgccgacgccc
aagagcaatgccgacttccgcggtctgctcttgtccaagaagtag
DBGET
integrated database retrieval system
