Pollicipes pollicipes (gooseneck barnacle): 119111234
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Entry
119111234 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX55-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppoi03009
]
119111234
Enzymes [BR:
ppoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119111234
Ribosome biogenesis [BR:
ppoi03009
]
Eukaryotic type
Pre-60S particles
Helicases
119111234
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
119111234
NCBI-ProteinID:
XP_037090949
EnsemblRapid:
LOC119111234
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MSMSRAWKDLKLSQPVMRAVLKRFEYELMTPVQAACIPQFMNYKDVAVEAVTGSGKTVAF
LVPLLEILLSKCMAVRKHDVYAVIISPTRELATQICEVLDVFLLELPQFSRQLFIGGTNP
ATDVQKLSEEGSNIIVATPGRFHDLLERRESGARLQAALRCLEVLVLDEADRLLDLGFER
QLNDILNRLPRQRRTGLFSATQTDEVQKLVRAGLRNPVAITVREKQGVSRTPHQLENFYM
ICEAKHKLGTLIEMLREKVASKEKVMVFFSTCAMVEYLTVVIKELVKCPNVLSIHGKMKS
KRFKIFDKFRKMESGVLLCTDVMARGVDIPDVQLVVQYDPPSAAAAFVHRCGRTARIGRE
GAALVLLLPAEITYVQFLQLNQKVALAEMAAPPEPPQFTDELRRLQTADRANYDRATRAF
VSLVQAYAKHECRLIFQLKELPLGQLATAMGLLQMPRMPELKGKTVTDFTPADVDLNAIP
YGKTLDSPSSGTDKDQREAARQAKLAAYRQTGAWPGAKPAKPKPWSXEAKAKKEQQKLKK
KKRREVKETKKAKKRRREVDQDDWDEMASEARTLKKLKKGKMTKRQFDKSMGMED
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgagccgggcatggaaggatctcaagttgtcgcaaccagtgatgagagctgtt
ctgaagcgttttgagtacgagttaatgacaccagtgcaggcagcatgcattcctcagttc
atgaactacaaggatgttgctgttgaagctgtgactggaagtggaaaaactgtagcattc
ttagtgcctctactggaaatcctactgagcaagtgtatggcagttcggaagcatgatgtg
tatgcagtcatcatatctcccactcgagaactggccacccagatctgtgaagtgttggac
gttttcctgctagagctgcctcagttctctaggcagctgttcattggtgggacaaatccg
gccacggatgttcagaagctgagtgaagagggcagcaacattatcgtggccaccccgggc
cggtttcacgatcttcttgagcggcgcgagtcgggcgcgaggctgcaggcagcgctcaga
tgcctggaggtgttggtgctggacgaggccgaccggctcctggacctgggcttcgagcgg
cagctgaatgacatcctgaatcggctgccacgccagcggcgcacgggtctcttctcggcc
acgcagacggacgaggtgcagaagctggtccgcgccggcctgcgcaaccccgtggccatc
accgtccgcgagaagcaaggagtttcgagaacaccacaccagctggagaacttctacatg
atctgtgaagcgaagcacaaactcggcaccctgattgagatgctgcgtgagaaggtggct
tcaaaggagaaggttatggtgttcttctctacctgtgccatggtggaatatcttacggtg
gtcatcaaagagctagtcaagtgtcctaatgttttaagcattcatggaaaaatgaagagc
aagcgcttcaaaatattcgacaagttccgaaaaatggagtcaggtgtgctgctgtgcacg
gacgtgatggcacgcggcgtggacatcccggacgtgcagctggtggtgcagtacgacccg
ccgtcggccgccgcggcattcgtgcaccggtgcggccggacggcgcggatcggccgggag
ggcgccgcgctcgtcctcctgctgcccgccgagatcacctacgtccagttcctgcagctc
aaccagaaggtggcgctggcggagatggcggcgccaccggagccgccccagttcaccgat
gagctgcgccgactgcagacggccgaccgggccaactacgaccgcgccacacgggccttc
gtgtccctcgtgcaggcgtacgccaagcacgagtgccgcctcatattccagctgaaagag
ctgccgctaggccagctggccacggccatgggcctgctgcagatgcccaggatgccggag
ctcaaggggaagacagtgacggacttcacccctgcggatgtggaccttaacgccataccg
tatggaaagacgctggactcgccatccagcggcactgacaaggaccagcgcgaggcggcg
cgccaggccaagctggccgcttaccggcagacgggggcctggcccggagccaagccggcc
aagcccaagccctggagcnntgaggccaaggccaaaaaggagcagcagaagctgaagaag
aagaagcggcgcgaggtcaaggagacgaagaaggcgaagaagaggcggcgagaggtggac
caggacgactgggacgagatggccagcgaagccaggacccttaagaagctaaagaaggga
aagatgaccaagcggcaatttgacaagtcgatgggcatggaagactga
DBGET
integrated database retrieval system
