Pollicipes pollicipes (gooseneck barnacle): 119111529
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Entry
119111529 CDS
T08250
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03020
RNA polymerase
ppoi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119111529
09124 Replication and repair
03420 Nucleotide excision repair
119111529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoi03021
]
119111529
03400 DNA repair and recombination proteins [BR:
ppoi03400
]
119111529
Enzymes [BR:
ppoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119111529
Transcription machinery [BR:
ppoi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119111529
DNA repair and recombination proteins [BR:
ppoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119111529
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
119111529
NCBI-ProteinID:
XP_037091238
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MYEEEDMYEDEEQEEISSELWQEACWIVINSYFDEKGLVRQQLDSFDEFIQMSVQRIVED
SPAIDLQAEAQHTSGEIETPPRYLLKFEQIYLSKPTHWETDGAPSAMFPNEARLRNLVYS
APLYVDITKTVIKDGEQPVVTQEQKTFIGKIPIMLRSTHCLLSGLTDRDLTQLNECPLDP
GGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAFKAEIRSAVEYSSRPTSTLWVNMLA
RSGQNVKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEMV
KPSLDEAFVIQEQNVALNFIGARGAKPGVTKEKRIKYAREILQKEMLPHVGVSDFCETKK
AYFLGYMVHRLLMASLSRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLLKEVRMYAQK
FIDNGKDFGLHLAVKTSTITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSH
LRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSPI
LEFLEEWSMENLEEIAPSAIIDATKIFVNGCWVGIHRDPEQLMTTLRKLRRQMDIIVSEV
CMVRDIRDREIRIYTDAGRICRPLLIVEKGQXLLLKKRHIDMLKEREYNNYSWHDLVASG
VVEYIDCLEEETTMIAMTPDDLSGEKDNVYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNYHVRMDTLAHVLFYPQKPLVTTRSMEYLRFRELPAGINSI
VAIACYTGYNQEDSVVMNASAVERGFFRSCFYRSYKDAETKKIGDQEETFERPSRDTCQG
MRNAIYEKLDDDGIVAPGVRVSGDDVIIGKTIVLPENDDEKRSPRLSVWNWCAIRQPSVG
PTRAPSGGVSSRPPTYRSMSSTRLPE
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaagaggaagatatgtacgaggatgaggagcaggaggagatctcctcggagctc
tggcaggaggcctgctggatcgtcatcaactcctacttcgacgagaagggcctggtccgg
cagcagctggactcgttcgacgagttcatccagatgtcggtgcagcggatcgtggaggac
tcgccggccatcgacctgcaggcggaggcgcagcacacctcgggcgagatcgagacgccg
ccgcgctacctgctgaagttcgagcagatctacctctcgaagccgacccactgggagacg
gatggcgcgccgagcgccatgttcccgaacgaggcgcgcctgcgcaacctggtctactcg
gccccgctctacgtggacatcacgaagacggtcatcaaggacggcgagcagcctgttgtc
acacaggagcagaagaccttcatcggcaagatccccatcatgctgcgctccacacactgc
ctgctgtcgggcctgacggaccgcgatttgacgcagctcaacgagtgcccgctcgacccg
ggcggctacttcatcatcaacggctcggagaaggttctcatcgcccaagagaaaatggcg
accaacacggtgtacgtgttcagcatgaaggacggcaagtacgcgttcaaggcggagatt
cgctcggcggtggagtactcgtctcggcccacctctacgctgtgggtcaatatgctggcc
aggagcggacagaacgtgaagaagtctgcgatcggtcagcggatcatcgccatcttgccg
tacatcaagcaggagatcccgatcatgatcgttttccgagcgctgggcttcgtcgccgac
cgggacatcctcgagcacatcatctacgacttcgacgaccccgagatgatggagatggtg
aagccctcgctggacgaggcgttcgtcatccaggagcagaacgtggcgctcaatttcatc
ggcgctcgcggagccaagccaggcgtgacgaaggagaagcgtatcaagtacgcgcgcgag
attctgcagaaggagatgctgccccacgtcggcgtgtccgacttctgcgagaccaagaag
gcttacttcctcgggtacatggtgcaccgtctgctgatggcctcgctgagccggcgcgag
ctggacgaccgtgatcactacggcaacaagcggctggacctggccggaccgctgctggcc
ttcctcttcagggggctgttcaagaacctgctgaaggaggtccgcatgtacgcccagaaa
ttcatcgacaacggcaaagactttggcctgcacctggccgtcaagacctccaccatcacg
gatggcctcaagtactcactggccaccggcaactggggtgaccagaagaaggcgcaccag
gcgcgcgccggcgtctcccaggtgctgaaccggctgacgttcgcctcgacgctgtcccac
ctacgacgggtgaactcgccgatcggccgcgacggcaagctggctaagccgcgccagctg
cacaacacgctctggggcatgatctgcccggccgagacgcccgagggcgccgccgtcggt
ctggtgaagaacctggcgctgatggcctacatctcggtcggctcgcagccgtctcccatc
ctcgagttcctggaggagtggagcatggagaacctggaggagatcgcgcccagcgccatc
atcgacgccaccaagatcttcgtgaacggttgctgggtggggatccaccgggacccggaa
cagctgatgaccaccctgcgcaagctgcgccgccagatggacatcatcgtgtcggaggtg
tgcatggtgcgggacatccgggacagggagatccgcatctacacggacgccggccgcatc
tgccggccgttgctcatcgtggagaagggccagnngctgctgctgaagaagcggcacatc
gacatgctgaaggagcgggagtataacaactacagctggcacgacctggtggcctccggc
gtggtggagtacatcgactgcctggaggaggagaccaccatgatcgccatgacgccggac
gacctgagcggcgagaaggacaacgtctactgcaccacctacacccactgcgagatccac
cccgccatgatcctgggcgtctgcgcctccatcatccccttccccgatcacaaccagagc
ccgaggaacacgtaccagagcgccatgggtaagcaggccatgggcgtgtacatcaccaac
taccacgtgcgcatggacacgctggcgcacgtgctgttctacccgcaaaagccgctggtg
accacgcgcagcatggagtacctgcgcttccgcgagctgccagccggcatcaactcgatc
gtggcgatcgcctgctacaccggctacaaccaggaggactcggtggtcatgaacgcctcg
gccgtggagcgcggcttcttccgctcctgcttctaccgcagctacaaggacgccgagacg
aagaagatcggagaccaggaggagacgttcgagcggccgtcgcgcgacacgtgccagggc
atgcgcaacgccatctacgagaagctagacgacgacggcatcgtggcgccgggcgtgcgc
gtctccggcgatgacgtcatcatcggcaagacgatcgtgctgcccgagaatgacgacgag
aagcggtcgccgcgtctgagcgtctggaactggtgcgccatcagacagccgagcgtgggg
ccgaccagggcgccgtctggtggcgtctccagcaggccgcccacgtacaggtcgatgtcg
tctacgcgcctgccggaatag
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integrated database retrieval system
