Pollicipes pollicipes (gooseneck barnacle): 119111574
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Entry
119111574 CDS
T08250
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119111574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119111574
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
119111574
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_14
TPR_17
TPR_11
TPR_2
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_19
ARM_TT21_C
TPR_7
Alkyl_sulf_dimr
TPR_9
TPR_15
DUF6584
Motif
Other DBs
NCBI-GeneID:
119111574
NCBI-ProteinID:
XP_037091279
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MDKHSKSLLKSAKEAIKGKDHAAALELCKEVLSTDKKNYTALVFSGACYQELGDAEKTVE
MFERAIEISSELPLAWQGLGSFYEKAGSSKHQDSLIKVYSKLLSILSNDEGKAAELCSKL
SWLLVHANRLGECIQTLCRWSICSKESFDPSKITTVLKDKKVSDEQAEEILNILNKVISE
ENTARNKEFLSHQAILLQQLSRWPQLLAVAQLMWRTFPDSVVAAEWILRVYVESAETVTQ
LDTVLAFMDTNEPDNIWSQISRGKLLFLKADWAGTLQQLEPGALGTAGDIAAVHLMRGRA
QLAVHGYAGAERSLQAALSRAEPAGTAERLRALGLTLWSVGSREQAAARFLEAAKQDPHH
PEPFFYLGQYYEQVGGDASRALRCYQKACRLCPGEPRASAALSDLYRQRGEHELNVALLT
AVTESRPDAVASRWAWFRLGLHHLQASEPQRAVSCLQTVVRAEPADAVAWECLGDAYRLR
GAYTSAVQAFGRAAALDQSAVYARLQVAEIRQRLGLLQEAEDGYLDTLRARPGYVPALKG
LGETHLRRAHELLRRQLPGSAHDSCQLAADALAAAVLDQAGMSCLWKELADVLYLTATLP
PRYRRLDVPHQLLPAADERTAETGTLAAAQLADVAIRCYSQAVAIEDRGSLWHDLAQTYR
LRAAMCDASEAEAAERAAQRALQCAHQATRLLPTDPSVWNTLGVIACGRHVHDRRLAQHA
FIKSLRLMETAMVWTNLACLYMLSDQLMLAHEALTKAQSVEPAYCGAWTGQALIAERLDP
DQAMDLFRHAVSLAPHPLAALGYGRWVSRELRDPAAWNTARYRFNIERMQAVTVASDALA
CYTDAAPDDAAGWNLAGLLAERQGRRRGALDACQRALALLEGATDVEPAAVDAVRVNCAR
LLTATGRCPEAIAEYGRLSEASFHSQCGLALALHRAERYEQAYEAYEGALHWLTPDDANR
SHTLVAVATMLYQFGDAENARTQLLKSFQLEPASERGLLALTALRALQAAVHRHPQQSRL
WRLLCAGLLQLRPELTAAAVTTAAAAQRLDASADQDADEVTDLVCQSQLRAGEGAAALRA
AQRAVLRRPDSAAAWCDLVCSVSSDALRRNHRNQLNSPTTARDRVTSPYVPRFQRITWA
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacactcaaagtccctgttaaagtctgcaaaagaagccattaagggaaaggat
catgcagcagctctggaattatgtaaggaagtgctatcaacagacaagaaaaactacaca
gcccttgtgtttagtggagcatgctatcaagagttaggtgatgcagaaaagacagttgag
atgtttgaaagggctattgaaatttcatcagagttgccattggcttggcaaggactgggc
tcattctatgaaaaagcaggatcttccaagcatcaagacagcttgataaaagtctactcc
aagctgctgagtatcctctccaatgatgagggtaaagctgctgagctttgttccaagtta
tcctggctgctagtgcatgcaaacaggcttggtgaatgcatccagacattgtgtaggtgg
agcatatgtagcaaagagagctttgacccttctaaaataactacagtcttgaaagacaag
aaggtctcagatgaacaggctgaagaaattctcaacattttaaacaaagtcatttcagag
gagaacactgcaagaaataaagagtttttgtcccatcaagctattctactacaacagctc
tcaaggtggccacagttgcttgctgtagctcagctcatgtggagaacatttccggacagt
gtggttgcagctgaatggatcctgcgtgtgtatgtggaatcagctgaaaccgttacacag
ctggatacagtcctggctttcatggacaccaatgagccagacaacatatggtctcaaata
agccgtggcaaactactcttcctgaaggcagactgggccggcacgcttcaacagctggag
cctggagcgctgggcactgccggcgacatcgccgccgtgcacttgatgcgcggccgtgcg
cagctggcagtgcatggctatgctggcgccgagcgcagcctgcaggccgcgctgagccgc
gcggagccagccggcacggccgagaggctgcgcgcgctcggcctgacgctctggagcgtt
ggcagccgcgagcaggcagccgcccgattcctggaggcggccaagcaggacccgcaccat
ccggagccgttcttctacctgggccagtactacgaacaggtgggcggcgacgctagccgc
gccctgcgctgctaccagaaggcgtgccggctgtgcccgggcgagccgcgcgccagcgcc
gcgctcagcgacctctaccggcagcgcggcgagcacgagctgaacgtggcgctgctgacg
gccgtgacggagagccggccagacgcggtggccagtcgctgggcctggttccggctggga
ctgcaccacctgcaggcgagcgagccgcagcgcgccgtcagctgcctgcagacagtggtg
cgcgccgagccggcggacgccgtcgcctgggaatgcctgggtgatgcgtaccggctgcgc
ggcgcgtacacgtcggccgtgcaggcgttcggtcgcgccgccgcgctggaccagtcggcg
gtgtacgcgcgcctccaggtggccgaaattcgccagcggctcggcctactgcaggaagcc
gaggatggctatctagacacactgcgcgctcggcccggctacgtgccggcgctgaagggt
ctcggcgagacgcacctgcggcgcgcgcacgagctgttgcgccgccagctgcccggcagc
gcgcacgatagctgccagctggcggccgacgcgctggcggcggccgtgcttgaccaggcc
ggcatgagctgcctctggaaggagctggccgacgtgctgtatctgactgctacgctgcca
ccccgctaccgccggctggatgtgccgcaccaactgctgcctgccgccgacgagcggacc
gccgagacgggcacgcttgcggccgcccaactggcagacgtggccatccgctgctactcg
caggcggtggccatcgaagaccggggcagtctgtggcacgacctggcgcagacgtaccgg
ctgcgtgcggccatgtgcgacgctagcgaggcagaggcggccgagcgggcggctcagcgc
gcgctgcagtgcgcccatcaggcgacgcggctcctgccgaccgacccgtccgtgtggaac
accctgggcgtgatcgcctgtgggcgtcacgtgcacgaccgccggctggcgcagcacgcg
ttcattaagtcgctgcgcctgatggagacggccatggtgtggaccaacctggcctgcctt
tacatgctgagcgaccagctgatgctggcgcacgaggcgctcaccaaggcgcagagcgtc
gagccggcctactgcggcgcctggacgggccaggcgctgatagccgagcgcctggacccc
gatcaggccatggatctgttccggcacgccgtctcgctggcgccgcacccgctggcggcg
ctcggctacggccgctgggtcagccgtgagttgcgcgacccggccgcctggaacaccgct
cggtaccgcttcaacatcgagcgcatgcaggcggtgacggtggcgagcgacgccctggcc
tgctacacggacgccgcgcccgatgacgcggccggttggaacctggccgggctgctggct
gaacggcagggccgccggcgcggtgcgctggacgcctgccagcgcgcgctggcgctgctg
gagggcgcgacggacgtcgagccggcggcggtggacgcagtgcgcgtcaactgcgcccgc
ctgctgacggcgaccggtcgctgcccggaggcgatcgccgagtacggccggctgtcggag
gccagcttccactcgcagtgcggcctggcgctggcgctgcaccgcgccgagcgctacgag
caggcgtacgaggcgtacgagggggcgctccactggcttacgcctgatgatgctaatcgg
tcgcacacgctcgtggccgtggccaccatgctgtaccagttcggcgacgctgagaacgcg
cgcacacagctgctgaagagctttcagctggagccggcgtcggagcggggcctgctggcg
ctgacggcgctgcgcgcgctgcaggcggccgtgcaccggcacccgcaacagtcccgtctc
tggcgactgctgtgtgccggactgctacagttgcggcctgagctgacagcggctgccgtc
accaccgccgccgccgcacagcgcctggacgcgtccgctgaccaggacgccgacgaggta
acggacctggtgtgccagagccagctgcgcgccggcgagggcgcggcggccctgcgcgcc
gcccagcgcgccgtgctgcgccggccagacagcgccgccgcctggtgcgacctggtgtgc
tccgtcagcagcgacgcgctacggcgcaaccaccgcaaccagcttaacagcccaacaaca
gcgcgcgatcgcgtcacatcgccgtacgtgcccagattccagcgtatcacatgggcttga
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