Pollicipes pollicipes (gooseneck barnacle): 119111602
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Entry
119111602 CDS
T08250
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119111602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppoi03032
]
119111602
03400 DNA repair and recombination proteins [BR:
ppoi03400
]
119111602
DNA replication proteins [BR:
ppoi03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
119111602
DNA repair and recombination proteins [BR:
ppoi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
119111602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
RTT107_BRCT_5
TopBP1_BRCT0
ECT2_BRCT0
BRCT_TopB1_SLF1
BRCT_3
Motif
Other DBs
NCBI-GeneID:
119111602
NCBI-ProteinID:
XP_037091305
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MMFWMEMESLLSQDSQDQVNLYFVLPKNTSETTCSEKLGSCYQACLDIGFPCNWIKEEDV
LQKHPVKQDVFICDPFEGVAFEYLSSGKFKCVRVLGPPCLLACLSRSEPVPELPYPLYAA
AMRGMVITSTGFQKLEKTRLQRLVKLMSGVYSSDFHEGVTHLVAGVVASPKYQVAVTREV
PVMRAAWVDRVWEASCRQTVQATDPQFADLTCPPFQGLFICVSQLSRKDKEAIRKIIENN
GGSYMTQLECEKTSVLVSPSMDGEKVTFARRWQIPCVVPEWLYDSVERGWCLGMEEYTTA
VKAKLSSTPTKNHTMAYGELADLTVSTIMGANESRVRPVNETTMNETAAFTVPPAVAVDE
DLAKLDRIDLQEVLKAGQFLDGCKIHLMGFDARREDKLRRMLNTSGAMRFSQLLPSVTHV
VVSGGAVPESALSAAWRPHLQPQQETMLAADGTVGRGDDTTLEATQTLFGGLAVFLSGEL
DAKSAQEAAALLEEHGARQVAAPDAARFTVVPLVHEAPAADVDRLVTVAYLQHCVETDQL
LEPEYYHRPIPTFRHDILSGCVLGISSYSGRERQYLALLGESMGAEFQEVFARRDNPTKH
ARASTHLVCQSAEGHKFAAARRWGTPYGGVVSGAQPTSHTRKAWKRYVDAMEETPEGKRR
RVSTRRTVGQQGQENVPPNTPPPPAPAVRKPLRPTMVFSGMEPADRTRYTAAVERLGGIV
LDTATLEPATTHLVTSRPNRSEKHLAAVASGRWILQPAYLDACERAGQFLPEDAFEWGNS
DCLQASGLSKDSTEYKLSTAAYRWRRKIKEEGIPGAFHAMVAVLLTAGERCRAFQRLVTA
GGGRAVPLDQLHDQPGTVTHVFIEPARADKRQLTPALWRELARMRVPCLQPVYLNECLTS
ATPPRTDDWLLDEYRRLLADT
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgatgttttggatggaaatggagtccctcctctctcaggattctcaagatcaagtaaat
ctttactttgtgttaccaaaaaacacttcagaaacaacatgcagtgaaaagttaggatca
tgttatcaggcctgtttggacattggattcccatgcaactggattaaggaggaagatgtt
cttcagaagcatcctgtcaagcaagacgtattcatctgcgacccatttgaaggcgtggca
tttgaatatttgtcttcaggcaaatttaagtgtgtcagagtgctggggccgccctgcctg
ctggcctgcctcagccgcagtgagccggtacccgagctgccctacccgctgtacgccgcc
gccatgcggggcatggtcatcacctccaccggcttccagaagctggaaaagacccggctg
cagcggctggtcaagctgatgtcgggcgtgtactcgagcgacttccacgagggcgtcacg
cacctggtagccggtgtcgtcgccagccccaagtaccaggtggcggtaacgcgtgaggtg
ccggtgatgcgcgcagcctgggtggaccgggtctgggaggccagctgccgacagaccgtg
caggccaccgacccgcagttcgccgacctcacgtgcccgcccttccaaggcctcttcatc
tgcgtcagccagctcagcaggaaggacaaggaggccatcaggaagatcatcgagaacaac
ggcgggagctacatgactcagctggagtgcgagaagacgagcgtgctcgtgtcgccctct
atggacggcgagaaggtcactttcgcccgtcggtggcagataccctgcgtggtgccggag
tggctgtacgacagtgtggaacgcggctggtgcctcggtatggaggagtacaccaccgcg
gtcaaggcgaagctgtcctcaactccgacgaaaaaccacaccatggcctatggtgaactg
gctgacctgacggtgagcaccattatgggcgcaaacgagagccgcgtccgccccgtcaac
gagacgaccatgaacgagacggccgcgttcaccgtcccgccggcggtcgccgtcgacgag
gatttagcgaagctggaccgtatcgacctgcaagaggtgctgaaggccggccagttccta
gacggctgcaagatccacctgatggggttcgacgcgcgccgcgaggacaagctgcgccgc
atgctcaacacctctggcgccatgcgcttctctcagctgctgccatcggtcacgcacgtg
gtggtgtcgggcggcgcggtgccggagtcggcgctgtctgccgcctggcggccgcaccta
cagccgcagcaggagacgatgctggccgctgacgggacggtcggccgcggcgacgacacc
acgctcgaggccacgcagacgctgttcggagggctagcggtgttcctgagtggcgagctg
gacgccaagtcggcgcaggaggcggccgccctgctggaggagcacggcgcccggcaggtg
gcggcgccggacgcggcccgcttcaccgtcgtgccgctggtgcacgaggcgccggcggcc
gacgtcgaccggctcgttaccgtcgcctatctgcagcactgcgtcgagacggaccagctg
ctggagccggagtactatcaccggccgattccgacgttccggcacgacattctgtctggc
tgcgtgctcggcatcagctcctatagcggccgcgagcgccagtacctggccctgctcggc
gagagcatgggagccgagttccaggaggtgttcgcgcggcgcgacaacccgaccaagcac
gcgcgcgcctccacccatttggtgtgccagtccgccgaggggcacaagttcgcggcggcg
cgccgctggggcacgccgtacggcggcgtggtgagcggcgcccagcccaccagccacaca
cgcaaggcctggaaacgctacgtggacgccatggaggagacgcccgagggcaagcgacgg
cgcgtgagcacgcggaggacggtcggccagcaggggcaggagaacgtaccgccgaacacg
ccgccgccgccggcgcccgccgtccgcaagccgctccggcccaccatggtgttctccggc
atggagcctgcggatcggacacggtacacggcggcggtggagcggctgggtggcatcgtc
ctcgacacggccaccctggagccggccaccactcatctggtcaccagccggccgaaccgc
agcgagaagcacctggcggcggtggcgtcgggccgctggatcctgcagcccgcctacctg
gacgcctgcgaacgcgccggccagttcctgccggaggatgcatttgagtggggaaactcc
gactgtcttcaagcatcgggactcagcaaggactccacggagtacaaactgtccactgct
gcttaccggtggaggcgaaaaatcaaggaagaaggtatcccgggcgccttccacgccatg
gtggctgtgctgctgaccgccggggagcggtgtcgcgccttccagcggctggtcacggcc
ggcggcggccgcgccgtgccgctggaccagctgcacgaccagccgggtaccgtcacgcac
gtgttcatcgagccggcgcgcgccgacaagcgtcagctgacgccggcgctgtggcgagag
ctggcgcgcatgcgcgtgccctgcctgcagcccgtctacctgaacgagtgcctgacgagc
gccacgccgccgcgcaccgacgactggctgctggacgagtaccgccgcctactggccgac
acgtga
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