Pollicipes pollicipes (gooseneck barnacle): 119112046
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Entry
119112046 CDS
T08250
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03030
DNA replication
ppoi03410
Base excision repair
ppoi03420
Nucleotide excision repair
ppoi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119112046
03410 Base excision repair
119112046
03420 Nucleotide excision repair
119112046
03430 Mismatch repair
119112046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppoi03032
]
119112046
03036 Chromosome and associated proteins [BR:
ppoi03036
]
119112046
03400 DNA repair and recombination proteins [BR:
ppoi03400
]
119112046
DNA replication proteins [BR:
ppoi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119112046
DNA Replication Termination Factors
ELG1-RFC complex
119112046
Chromosome and associated proteins [BR:
ppoi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119112046
DNA repair and recombination proteins [BR:
ppoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119112046
Check point factors
HRAD17(Rad24)-RFC complex
119112046
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
nSTAND_NTPase5
Viral_helicase1
AAA_16
RCF1-5-like_lid
Mg_chelatase
Rad17
RuvB_N
nSTAND3
AAA_5
AAA_19
AAA_11
AAA_lid_RFC1
DEAD
AAA_assoc_2
ABC_tran
MeaB
AAA_18
AAA_2
AAA_30
IstB_IS21
AAA_25
DNAX_ATPase_lid
NTPase_1
MipZ
RNA_helicase
AAA_24
Aq_aa27
AAA_29
TRI4_N
CbiA
SRP54
Motif
Other DBs
NCBI-GeneID:
119112046
NCBI-ProteinID:
XP_037091915
LinkDB
All DBs
Position
Unknown
AA seq
339 aa
AA seq
DB search
MIMVEESEPGPSGDAKPAGNVPWIEKYRPHEFADIVGNEDTVARLEVFSRNGNVPNLILA
GPPGVGKTTTILCLARLMLGPAFKSAVLELNASNERGIDVVRNKIKTFAQTQVTLPRGRH
KIVILDEADSMTDGAQQALRRIMELYSNSTRFALACNTSEKIIEPIQSRCAMLRYSRLSD
AQLLAKLLRVCELEQVSYTDDGLEAIVFTAEGDMRQGLNNLQSTFRGFGHVNSENVFKVC
DEPHPMLIKDMLTHCAKADIDEAYKIMSHLWRLGYAAEDIITNVFRIVKHHELAEYLKLE
FLKEVGYTHMRIAQGETTLLQLSALLARLCRAASGLAAS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggtggaagaatcagaacctgggccatctggagatgcaaagccagcgggcaat
gttccatggattgagaagtacaggccacatgaattcgcagacattgtgggcaatgaggac
acagtggcacgactagaagttttctccagaaatggaaatgttcccaacctgatcttggcg
ggtccgccgggcgtgggcaagaccaccacgatcctctgcctggcgcgcctgatgctcggg
ccggcctttaagtcagccgtgctcgagctgaatgcctcgaacgagcgcggcatcgacgtc
gtccgcaataagatcaagacgttcgcgcagacgcaggtgacgctgccgcgcggccgacac
aagatcgtcatcctggacgaggcggacagcatgacggacggggcgcagcaggcgctccgt
cgcatcatggagctgtacagcaactcgacccggttcgcgctggcgtgcaacaccagcgag
aagatcattgagcctatccagtcgcgctgcgccatgctgcgctacagccggctgtcggac
gcccagctgctggccaagctgctgcgcgtctgcgagctggagcaggtgagctacacggac
gacggtttggaggccatcgtgttcacggcagagggcgacatgcggcagggcctcaacaac
ctgcagtctactttccggggattcggccacgtcaacagcgagaacgtcttcaaggtctgc
gacgaacctcatcccatgctcattaaggacatgctgacgcactgcgcgaaagccgatatc
gacgaggcctacaagattatgagccacctttggcggctggggtacgccgcggaggacatc
attaccaacgtgtttcggatagtcaagcaccacgaactcgccgagtacctgaagctcgaa
ttcctcaaggaagtgggctacacgcacatgcggatcgcgcagggcgagacgacgctgttg
cagctgtcggcgctgttggcgcggctgtgccgggctgccagcgggctggccgcctcctga
DBGET
integrated database retrieval system
