KEGG   Pollicipes pollicipes (gooseneck barnacle): 119112498
Entry
119112498         CDS       T08250                                 
Name
(RefSeq) DNA repair endonuclease XPF-like
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
ppoi  Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03420  Nucleotide excision repair
ppoi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:ppoi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    119112498
   03460 Fanconi anemia pathway
    119112498
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppoi03032]
    119112498
   03400 DNA repair and recombination proteins [BR:ppoi03400]
    119112498
DNA replication proteins [BR:ppoi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    119112498
DNA repair and recombination proteins [BR:ppoi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     119112498
SSDB
Motif
Pfam: ERCC4 HHH_5
Other DBs
NCBI-GeneID: 119112498
NCBI-ProteinID: XP_037092593
LinkDB
Position
Unknown
AA seq 928 aa
MSESVTPPSEAAPAAEEGTEKPSSQASQPEPSIQRPELEVKPALLRRLETVTKGAMLEYE
TQMLLDLLHEDGLLVTAKGLGLERLFAALVRVLCDPAQLVLVLGTSRAEEEHVTSQLEAD
GCSPLPRAVTADTSVTDRQQVYLQGGVLFVTSRILVVDLLTERCPADLVTGVLVYRAHGV
VESAQEAFILRLYRQKNKTGFIKAFSSSPLSFTSGFCQVQRVMRNLFVRNLYLWPRFHLQ
VNQALKQCTPDVVEIRVKMTPLMTSIQSALLDLINITVKEFKRLNASLDWDTMTVETVIS
RAFHKISRLRLDPVWNQLSARTRQLVADLRTLRALLLALPQLDCCSYYQLVAAQQTAERA
LNSGWAILDAAETVFVDAKQRVFGDAQPAPKRARADGGRPQVLHMEVPPKWSALSEVLAE
IRAEVTAAAADADPLLADKVLIVAADLVACRRIKEVLTLGAQAALWRRFQQQLASKFGED
AFVPSSAAEEPAAADGARQPAEPAPADAEQTRKGDGDADELLVTMPSSPLLLLLPAREAS
DPFQLQRSLQQCRPRYVVLYDLDVAVVRTLEVHQAATPERPMRVYSLMFGGTTEEQAYLT
ALRTEKQAFEYLIGEKSSMVVPEEREGRDEANADLERGAPAEEEAAAAAGSRQGGVRPPP
AEPPRVIVDMREFRSELPALLHRRGVDIVPATIEVGDYIITPDVCVERKSISDLIGSLMS
GRLYGQALAMGRHYRRPVLLIEFDQDKPFTLQGKYYLSSDMSSAQVVSRLQLLTLHFPRL
RLMWCPSPYASAELLHQLKVGEPEPSLAEARAATADRADTLAEDRVNPQIRDFISKLPGI
RPKTLYALLNKINSLMDLIQMTKESLAEVLGSETDAGHLHEALHTNLAASAAAAAGDASA
RRPAAAGRTARGRGGRPRFWRGKNKKKS
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgtccgagagcgtaacgcctcccagcgaagcggcacccgccgcggaggagggaacggag
aagccgtcctcccaggcctcccaaccggagccgtcaatccagcggccggagctggaggtg
aagccggctctgctgcgccgcctggagacggtgaccaagggcgccatgctcgagtacgag
acgcagatgctgctggacctcctgcacgaggacggcttgctggtcacggccaaagggctc
ggcctggagcggctgttcgcggcgctggtgcgcgtgctgtgcgacccggcgcagctggtg
ctggtgctgggcaccagccgcgccgaggaggagcacgtgacgtctcagctggaggccgac
ggctgcagcccgctgccgcgcgccgtcacggcggacacgtccgtcacagacaggcagcag
gtgtacctgcagggcggcgtgctgttcgtcacgtcccggatcttggtggtggacctgctg
acagagcggtgccccgccgacctggtcaccggcgtgctcgtctaccgcgcccatggcgtt
gtcgagtccgcccaggaggccttcatactgcgactctaccgccagaagaacaagactggc
ttcatcaaggccttctctagctcgccactgtccttcacatccggcttctgccaggtccag
cgggtcatgcgcaacctgttcgtgcgcaacctgtacctgtggccgcgcttccacctgcaa
gtcaaccaggcgctgaagcagtgcacgccggacgtggtggagatccgggtgaagatgacg
ccgctgatgacgtccatccagtcggcgctgcttgacctcatcaacatcactgtgaaggag
ttcaagcgactgaacgcgtcgctggactgggacacgatgacggtggagacggtcatctcg
cgcgccttccacaagatctcgcggctgcgcctggaccccgtctggaaccagctgagcgcg
cgcacccgccagctggtggccgacctgcgcacgctgcgcgcgctgctgctggcgctgccg
cagctcgactgctgcagctactaccagctggtggcggcgcagcagacggccgagcgggcg
ctcaactcgggctgggccatcctggacgcggccgagaccgtgttcgtggacgccaagcag
cgcgtgttcggcgacgcgcagccggcgcccaagcgcgcgcgcgccgacggcggccgaccg
caggtgctgcacatggaggtgcctcccaagtggtcggcactctccgaggtgctggcggag
atccgggccgaggtgaccgcggcggcagccgacgccgacccgctcttggccgacaaggtg
ctgatcgtggccgccgacctggtcgcatgtcgccgcatcaaggaggttctgacgttgggg
gcgcaggcggccctgtggcgccgcttccagcagcagctggcgtcgaagttcggcgaggat
gccttcgtgccgagctcggccgcggaggagccggcggcggccgacggcgcccgacagccg
gccgagccggccccggccgacgccgagcagacgcggaagggggacggcgacgctgacgag
ctgctggtgaccatgccgtcctcgccgctgctgctgctgctgccggcccgggaggcgtcc
gacccgttccagctgcagcgctcgctccagcagtgccggccgcgatatgtcgtcctgtac
gacctggacgtggctgtggtccgcacgctggaggtgcaccaggcggccacgccggagcgg
ccgatgagggtgtactcgctgatgttcggcggcactaccgaagagcaggcctacctgacg
gcactgcgcaccgagaaacaggcgttcgagtacctgatcggcgagaagtcgtccatggtg
gtgcccgaggagcgcgagggccgcgacgaggccaacgcggacctggagcgcggcgcgccg
gccgaggaggaggcggcggcggccgccggctcgcgccagggcggcgtccgcccgccgccg
gccgaaccgccgcgcgtcatcgtcgacatgcgcgagttccgctccgagctgccggcgctg
ctgcaccggcgcggcgtcgacatcgtgccggccaccatcgaggtgggcgactacatcatc
acgccggacgtgtgcgtcgagcgcaagtccatcagcgacctgatcggctcgctgatgtcg
ggccgactgtacggccaggcgctggccatgggccgtcactaccgccgacccgtcctgctc
atcgagtttgaccaggacaagccgttcacgctacagggcaagtactacctgtcgagcgac
atgtcgtcggcgcaggtggtcagccggctgcaactgctgacgctgcacttcccccggctg
cggctcatgtggtgtccctcgccgtacgcgtctgccgagctgctgcaccagctgaaagtc
ggcgagccggagcccagcctggccgaggcgcgcgccgccaccgccgaccgcgccgacacg
ctggccgaggatcgcgtcaacccgcagattcgggacttcatcagcaagcttccaggcata
aggccgaagactctatatgccttgctcaacaagataaattcgctcatggacctgattcag
atgaccaaggagagcctggccgaggtgctcggctcggagacggacgccggacatctgcac
gaggcgctgcacaccaacctggccgcctcggcagccgcggccgctggagacgcctcggcc
aggcggccggcggcggcgggccggacggcgcgcggccgcggcggccggccccgcttctgg
cgcggcaagaacaagaagaagtcgtga

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