Pollicipes pollicipes (gooseneck barnacle): 119112775
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Entry
119112775 CDS
T08250
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119112775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119112775
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119112775
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
119112775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
119112775
NCBI-ProteinID:
XP_037092950
LinkDB
All DBs
Position
Unknown
AA seq
221 aa
AA seq
DB search
MSQDSQMDGEAALDSQTAVFAVPGDCLCAVDASHAPGKGTCERSGYIYSCLVGRVHRVLQ
DDKTELVEVRTGQEQGCVPTAGSVVTARVTYVNPRFCRCEILCIGETVLKHKFRGLLKKE
DVRATERDKVKLYECFRPGDVILAKVVSLGDALSYVLSTAENELGVALAYSEAGHPMVPV
SWTEMACPATQTRELRKVAKIPPEDVAFRVARSAAAGATVG
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaggacagccagatggacggcgaggccgcgctggacagtcagaccgcggtgttc
gccgtgccaggggactgcctatgtgccgtggacgccagccacgcgccgggcaagggaacc
tgcgaacggtccggctacatctactcctgtctggtgggacgcgtgcacagggtgctgcag
gacgacaagacggagctggtggaggtgcgcaccggtcaggagcagggctgcgtgcccacc
gccggctcggtggtcaccgcccgggtgacgtacgtgaacccacgcttctgccgctgcgag
atcctctgcattggcgagactgtgttgaagcacaagttccgcggcctcctgaagaaggag
gacgtgcgcgccaccgagcgggacaaggtcaagctatacgagtgcttccggccaggggac
gtgatcctggccaaggtggtgtcgctgggagacgcgctctcctacgtgctgtcgacggcc
gagaacgagctgggcgtggcgctggcgtacagcgaggctggccatccgatggtgcccgtc
agctggacagagatggcgtgcccggccacgcagacgcgcgagctgcgcaaggtggccaag
atcccgcccgaggatgtagcgttccgcgtggcgcgctcggcggccgccggcgcgacggtc
ggctga
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