Pollicipes pollicipes (gooseneck barnacle): 119112933
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Entry
119112933 CDS
T08250
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi04140
Autophagy - animal
ppoi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119112933
04148 Efferocytosis
119112933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppoi04131
]
119112933
Membrane trafficking [BR:
ppoi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119112933
Hops complex
119112933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_C
Vps16_N
Chitin_bind_4
DUF7180
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
119112933
NCBI-ProteinID:
XP_037093130
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MLTTVLLCLAAAAEGQRNPGNQFFGGPLAPAPLTPLGQVPPAWRSTPSVTRRRTRPSTDV
PLSQGVAQYTFGYKTEDPAEATYSEQSEQRDGNAVTGFYSVLLPDGRVQVVNYVADEAGY
RATVAYQTPDGVPLPTPAGEAPSEHHWTPASNTVPTGDTWVPPYTAPAGGSWKLPVAAGP
SVTPWVLADNSIPVDSWTKSPRSALAGRSLETSSIGAGGGRSWGRQSVGHSRIGELVGAG
WSDDERLVLVDAAGQVSMYDMFGRLEHTLSLGQEVKKYTVASAEVFLSHQGTGLAVLCKN
HRFYMTTSLDKPLVKKLPEATGGSAAPSCWAVTAGRYRSALLVAKGLEISLLEADSKAQP
LPAPLPSTAQRVTQLVTNRAGDLLALLTDTGHLVMTSLDLRQVFCTVDTDVRQPAKQLEW
CGSYAVVGYWQSRLLVVSRRGDTITYSLDAPGRLCSENDCIRLVTAYSHELIEQVWSDSA
AVFRIGSMDPAAVLLETYREYEKRSHRADEYLRMIWNQLKQAVTSCVEAAGHEHSAELQK
LLLRAAQYGKSFIPELMDPEPYVSTCRYLRVLNSLRHHSHGMPLTMGQLREMPVSMLLDR
LMRRRLHFLALRVCRHLEVPRADGERRVLEAWAKHVVVAAGADGADGKHVAREIADRLGT
QSGISFADVAKTAIEAGKRGTAIQLLALEQQARRTVPLLIDLNMCDEALQRAAASGDPGL
AHSALLQLRDARGRAEFQMLIRNYPLMQSLYVKYLRGRGQTELLRDTMIQEDDFHGQGLL
RVREAYQETRVDLRISHLVAAQDCFKKAKNDFFATQTEDQHKLLKRQSNLEEKFNREYVG
LSLHDTISRLILYGELKLADSLRAEYKISDKRFWWTKLLALAEASQWVELEQFAKSKKSP
VGYEPFVDACMEHGNLHEAKKYLARVADDKKVKYYAKVGNLEEAARIAHEQRDRQALAYV
ESLCGNNNRALLEQISQYRQALKP
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgctgactacggtactgctctgcctggcggcggccgccgaaggccagcgcaaccccggc
aaccagttcttcggtggcccgctggcgccggcgcccctcacgccgctgggccaggtgccc
ccggcgtggcgcagtacaccttcggttacaagacggaggacccggccgtcaactgacgtc
ccgctgtcacagggcgtggcgcagtacaccttcggttacaagacggaggacccggccgag
gccacctactcggagcagagcgagcagcgcgacggcaacgccgtcaccggcttctactcg
gtgctgctgcccgacggccgcgtacaggtggtgaactacgtggcggacgaagcgggctac
cgggcgacggtggcgtaccagacgccggacggcgtgccgctgccgacaccggccggcgag
gcgccgtcagagcaccactggacgccggcctccaacacggtaccgaccggtgacacgtgg
gtgccgccgtacaccgccccggcgggtgggtcctggaagctgcccgtcgcggccgggccg
agcgttaccccctgggtgttggccgacaattcgatccccgtcgacagctggaccaagtcc
ccccgctcggcgctcgccggcagaagtctggagacgtcctccatcggcgccggcggtggc
cgcagctggggtcggcagtccgtgggccactcgaggattggagagctggtcggcgccggc
tggagcgacgacgagcgtctcgtgctggtggacgccgccggccaggtgtccatgtacgac
atgttcggccgcctggaacacacgctcagtctgggccaggaggtgaagaagtacacggtg
gcctcagccgaggtgttcctcagccatcagggtacggggctggccgtgctctgcaagaac
caccgtttctacatgaccacttcactggacaagccgctggtgaagaagctgccggaggcc
actggtggcagcgcagcgcccagctgctgggcggtgacagccggccgctaccgatcggcg
ctgctggtagccaagggtctggagatctccctgctggaagcagactccaaggctcagcca
ctgccggcgccactgccgtcgaccgcccagcgcgtgacgcagctggtgacgaaccgggcc
ggtgacctgctggccctgctcaccgacaccggccatctggtgatgacgtcactggacctg
cgccaggtgttctgcaccgtcgacacggacgtccgccagccggccaagcaactggagtgg
tgcggctcgtacgcggtggtcggctactggcagagccggttgctggtggtgagccgacgc
ggcgacaccatcacctactcgctggacgcccccggccgactctgctccgagaacgactgc
atccgtctcgtcaccgcctacagccacgagctcatcgaacaggtgtggagcgactctgcg
gccgtgttccgcatcggctccatggacccggccgccgtccttctggagacctaccgcgag
tacgagaaacgcagccaccgcgccgacgagtacctgcgcatgatctggaaccagctaaag
caggccgtcacgtcgtgcgtagaagcggccggccatgagcatagtgccgagctccagaag
ctgttgctcagggcggctcagtacggcaaaagctttatcccggagctgatggatccggag
ccgtacgtctccacgtgccggtatctgcgcgtgctcaactcgctgaggcaccacagccac
ggcatgccgctcaccatggggcagctgcgcgagatgcccgtctcgatgctgctggaccgt
ctgatgcgccggcggctgcacttcctggcgctgcgcgtgtgccgccacctggaggtgccg
cgcgccgacggcgagcgtcgcgttcttgaggcctgggccaagcacgtggtggtggccgcc
ggcgctgacggcgcggacggcaagcacgtggcgcgcgagatcgccgaccggctcggcacc
cagtcgggcatctcgttcgccgacgtggccaagacggccatcgaagccggcaagcgcggc
actgccatccagctgctggcgctggagcagcaggcgcgccgcaccgtgccgctgctgatc
gacctcaacatgtgcgacgaggctttgcagcgcgccgccgcctcgggtgacccgggcctg
gcccactcggccctgttgcagctacgcgacgccagggggcgcgccgagttccagatgctg
ataaggaactatccgctgatgcagtctctgtacgtgaagtatctgcgcggccgtggccag
accgagctgctgcgggacaccatgatccaggaggacgactttcatggccaaggcctgcta
cgggtcagggaggcctaccaagagacaagggtggaccttcgcatatcacatctagtcgcc
gcccaggactgcttcaagaaagcaaaaaacgatttcttcgccacccagactgaggaccag
cacaagctgctgaaacggcagtcaaacctggaggagaagtttaaccgggagtacgtgggg
ctctcgctgcacgacaccatcagtcggctcatcctgtacggagagctgaagctggccgac
agcctgcgggccgagtacaagatctccgacaaacgtttctggtggaccaaacttctggcg
ctagccgaggccagtcagtgggtcgaactagagcagtttgccaagagcaagaagtcgccc
gtgggatacgagccgttcgtggatgcgtgcatggagcacggcaaccttcatgaggcgaag
aagtacctggcgcgggtggccgacgacaagaaagtcaagtactacgccaaagtcgggaac
ctagaggaggcagccaggatcgcgcacgagcagcgcgaccgacaggcgctggcttacgtg
gagagtctgtgcggcaacaacaaccgggcgctgctggagcagatcagccagtaccggcag
gcgctcaagccgtag
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