KEGG   Pollicipes pollicipes (gooseneck barnacle): 119113102
Entry
119113102         CDS       T08250                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
ppoi  Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ppoi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    119113102
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ppoi04121]
    119113102
Enzymes [BR:ppoi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     119113102
Ubiquitin system [BR:ppoi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    119113102
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     119113102
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_EML_2 WDR55 Beta-prop_RIG_2nd EIF3I zf-C3HC4_2 Beta-prop_WDR19_1st Beta-prop_TEP1_C zf-C3HC4 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_DCAF4 zf-RING_UBOX zf-RING_2 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_WDR90_POC16_2nd zf-C3HC4_3 Beta-prop_CAF1B_HIR1 Beta-prop_IFT122_1st RING_XB3-XBAT31 Beta-prop_SCAP zf-C3HC4_4 zf-RING_5 Beta-prop_WDR35_TULP_N WD40_RFWD3 zf-RING_10 PEP5_VPS11_N Prok-RING_4 Beta-prop_WDR75_1st WD40_like Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Beta-prop_IFT140_1st zf-rbx1 U-box WDR90_beta-prop_4th Rad50_zn_hook zf-Nse TRAF3_RING DZR_2 Sina_RING Zn_ribbon_6 zf-RING_6
Other DBs
NCBI-GeneID: 119113102
NCBI-ProteinID: XP_037093329
LinkDB
Position
Unknown
AA seq 648 aa
MSGNTAGLGRPGPSKGRRSRTRVMNGVASSFQKQSEDFLCPICFEVIEEAMMTRCGHTFC
NRCIVQSIQMNSRCPKCSRALDEDNIYPNFLLNELITKHRRAERTPTQLGRLGPAELQEY
LTAEASGLGLPNVTLMLELLEARRAALEADSFRTQSQLLSEFLASLKRQREDMLSQLQRE
IRVIDADLARVDGALGERRRADDAQEERRRGAAQADVTMVPCVPSLEAERGALPADAASP
EASLASDGEVPEGFNVGRDADAQSPDSDAMARRRRQVHIHFDDLVKCYFSLRPRAVHLGA
GDEEADGAAALDTFSDALSRLTRFSGVRPLASLNYSSDLVPSSSIVSSIEFDKDRELFAI
AGVTKKIKIYDYGFVVRNAIDIHYPTLEMACTSKISCVAWNGYHKSVLASSDYEGAITVW
DTATGQQRHVYQEHEKRCWSVDFNLVDTNLIASGSDDFTVKLWATNASHSILSLEAKVNV
CCVKFNPSSRFQLAFGSADHSVHYYDLRNIKEPLRVFKGHQKAVSYVKFVSDTDLVSAST
DSQLKLWNVNSPSCLRSFHGHVNEKNFVGLATDGNYVACGSENNSLYIYYKGLSQSVLSY
KFESPRSLLERERADDGNQFVSAVCCKSGSNVVVAANSQGTIKVLELY
NT seq 1947 nt   +upstreamnt  +downstreamnt
atgtctggcaacactgccggactggggcggccaggaccctcgaagggtcgtcgctcccgc
acccgcgtgatgaacggcgtggccagctccttccagaagcagagcgaggatttcctctgt
cccatctgtttcgaggtcattgaggaggcaatgatgacacgctgcggccacaccttctgc
aaccgctgcatcgtgcagagcatccagatgaacagccgctgccccaagtgtagccgcgca
ctcgacgaagacaacatctaccccaactttctgctgaacgagctaatcacgaagcaccgg
cgcgctgagcggacgcctacgcagctgggccgcctgggaccggccgaactgcaggagtac
ctgaccgccgaggcgtccggcctcggcctgcccaacgtcacgctgatgctggagctgctg
gaggcgcgccgcgcggcgctcgaggccgactcgttccgcacgcagagccagctgctgagc
gagttcctggcgtcgctgaagcggcagcgggaggacatgctgtcgcagctgcagcgcgag
atccgggtgatcgacgcggacctggcgcgcgtcgacggcgctctgggcgagcggcgacgc
gccgacgacgcgcaagaggagcgccggcgcggcgcggcgcaggccgacgtcaccatggtg
ccgtgcgtgcccagcctggaggcggagcggggcgcgctgcccgccgacgccgcgtcgccc
gaggcttcgctcgcctccgacggcgaggtgcccgagggcttcaacgtgggccgcgacgcg
gacgcacagagccccgacagcgacgcgatggcgcgccgccgccgccaggtgcacatccac
ttcgacgacctggtaaagtgctacttctcgctgcggccgcgcgccgtgcacctgggcgcg
ggcgacgaggaggcggacggcgcggcggcgctggacacattcagcgacgcgctgtcgcgg
ctgacgcgcttcagcggcgtgcggccgctcgcctcgctcaactactcgtccgacctcgtg
cccagctccagcattgtgtccagcatcgagttcgacaaggaccgcgagctgttcgccatc
gccggtgtcaccaagaagatcaagatctacgactacggcttcgtggtgcgcaacgccatc
gacatccactatccgacgctggagatggcgtgcacgtccaagatcagctgcgtggcgtgg
aacggctaccacaagtccgtgctggccagttcggactacgagggagccatcaccgtctgg
gacaccgccaccggccagcagcgacacgtctaccaggagcacgagaagcgctgctggagt
gttgacttcaacctggtcgacaccaacctgatcgcgtcgggcagtgacgacttcacggta
aagttgtgggccactaatgctagccactcgatcctctcgctcgaggctaaggtgaatgtg
tgctgcgtgaagttcaacccgagcagccggtttcagctggcgttcgggtcagccgaccac
agcgtgcactactacgatcttcgcaacatcaaggagccgctgcgcgtctttaagggtcac
cagaaggcggtgtcgtacgtcaagttcgtcagcgatacggacctcgtgtcggcctccacc
gacagccagctgaaactatggaatgtgaactcgccctcgtgcctgcgctccttccacggc
cacgtgaacgagaagaatttcgtcggcctggccaccgacggcaactacgtggcctgcggc
tcggagaacaactcgctctacatctactacaagggcctgagccagagcgtactgtcgtac
aagttcgagtcgccccgctcgctgctcgagcgcgagcgcgccgacgacggcaaccagttc
gtgtcggccgtctgctgcaagagcggaagcaacgtggtggtggcagccaacagtcagggc
accataaaggtgctggagctctactaa

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