Pollicipes pollicipes (gooseneck barnacle): 119113859
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Entry
119113859 CDS
T08250
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119113859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoi03021
]
119113859
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119113859
Transcription machinery [BR:
ppoi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119113859
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119113859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCHC
zf-CCCH_3
zf-CCCH_4
zf-C2H2_10
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
119113859
NCBI-ProteinID:
XP_037093982
LinkDB
All DBs
Position
Unknown
AA seq
280 aa
AA seq
DB search
METLVANVDDMVFDIEVTLREQLGAQSLPFAGMDKSMSGVCNFFAKGRCTRGDLCPFRHL
RGDRSIVCKHWLRGLCKKGDSCEFLHEYDMTKMPECYFYAKFNACHNKECPFLHIDPETK
QRDCPWYDRGFCRHGPLCRNRHVRRVLCLSYLAGFCPAGAGCRLIHPRFELPQSTEEGKP
GSKGKSNITCHYCGEVGHKVVNCFKMSPDKREAQLRQASEKYEAAAARYIGGGSHGRHDT
DRITCYKCGEKGHFANRCTHGAYSFLSSAPPAPAQAPGAT
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctggtggccaacgtggacgacatggtgttcgacatcgaggtgacgctgcgg
gagcagctgggcgcccagtcgctgccattcgctggcatggacaagtccatgtcgggtgtg
tgcaacttcttcgccaagggtcggtgcacgcgcggagacctgtgcccgttccgacacctg
cgcggcgaccgctccatcgtctgcaagcactggctgcgcggactctgcaagaagggggac
tcgtgcgagttcctgcacgagtacgacatgaccaagatgcccgagtgctacttctacgcc
aagttcaacgcctgccacaacaaggagtgtccgttcctgcacattgacccggagaccaag
cagcgcgactgcccgtggtacgaccgcggcttctgccggcacgggccgctctgccgcaac
cggcacgtgcggcgcgtgctctgcctcagctacctggccggcttctgcccggccggcgcc
ggctgccgcctcatacatccgcggttcgagctgccgcagagcaccgaggagggcaagccc
ggctccaagggcaagtccaacatcacctgccactactgcggcgaggtgggccacaaggtc
gtcaactgcttcaaaatgtcgcccgacaagcgggaggcgcagttgcgccaggcctcggag
aagtatgaggcggcggccgcccggtacatcggcggtggctcgcacggtcgccacgacacg
gaccgcatcacgtgttacaagtgcggcgagaagggccacttcgccaaccgctgcacgcac
ggcgcctactcgttcctcagctcggcgccgccggcgcccgcccaggcgccgggcgccacg
tga
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