Pollicipes pollicipes (gooseneck barnacle): 119114019
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Entry
119114019 CDS
T08250
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119114019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoi03019
]
119114019
Messenger RNA biogenesis [BR:
ppoi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119114019
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
119114019
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
119114019
NCBI-ProteinID:
XP_037094145
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MAASRKLQGEIDRCLKKVTEGVETFEDIWSKVTHATNSNQKEKYEADLKKEIKKLQRLRD
QIKTWQASAEVKDKSSLVEHRKLIETQMERFKGLERETKTKAYSKEGLGAATKLDPVQKE
RDECTRWLSNSIEQLNVQIDQFEAEMDGLTAKRKRDKDKSERLDQLKHWIERHRFHIKKL
ETLLRMLDNNAVDMDSVKKIREDVEYYTESNQEPEFDENEYIYDDINMDNMEEMFIADVG
VTDGVTRGEESSETPTNSLHSGSSPSPLNNSHSAAAAEVNHAADDNKRTRRSVSEDSSMT
QKTKHASGSSNKAAPPSAGSLTASSKATAVSASQPSPPAGTSRSQSTPLASAAAGSGLVA
APSPNFASVAAASQPPAAASVHILTTTTPSSSSQQQQQQQQQQQQQQQQGQQVNGEKPAD
PSSMKSLAQHLERTTLNASPADVNKTPPTNEATIPVLYSVAPLGPVPMTKEHDYQYQMLQ
AAFYHMPHPSDSERLRAYLPRNPYPTPPYYPQVPPPGSDSIDFFLKLSVETLFFIFYYME
GTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVITDEYEQGTYVYFDFEKWSQRKKEG
FKFEYKFLEDRDLN
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtccagaaaactacaaggtgaaatagacaggtgcctaaagaaggtgacagag
ggcgtcgagacgttcgaggacatctggtccaaggtgacccatgccacaaacagcaatcag
aaggagaagtatgaggctgacctcaagaaggagatcaagaagctgcagcggctgcgggac
caaatcaagacctggcaggcgtctgctgaggtcaaggacaagagcagtcttgtcgaacat
cgaaagctcattgaaacgcaaatggagcggttcaagggtctggagcgggagaccaagacc
aaggcctactccaaggagggtctgggcgcggccaccaagctggacccggtacagaaggaa
cgcgacgagtgcacgcgctggctttccaacagtatagagcagctgaatgtgcagattgac
cagttcgaggctgagatggacggcctcactgcgaagaggaagcgcgacaaagacaagtcg
gagcggctcgaccagctgaagcactggatcgagcggcaccgcttccacatcaagaagcta
gaaacgctgctgcgaatgctcgacaacaacgccgtcgacatggactcggtgaaaaagatc
cgcgaggacgtggagtactacaccgagtcgaaccaggagcccgagttcgacgagaacgag
tacatctacgacgacatcaacatggacaacatggaggagatgttcatcgctgacgtgggc
gtgacggacggcgtgacgcggggcgaggagtcgagcgagacgccgaccaactcgctgcac
tcaggctcgtcgccgtcgccgctcaacaacagccattccgccgccgccgccgaagtcaac
cacgccgccgacgacaacaagcggacgcggaggtccgtgtccgaagactcgtcgatgacg
cagaagacgaaacacgcgtcgggctcgtcgaacaaggcggcgccacccagcgccggctcg
ctgaccgccagctcaaaggccaccgcagtgtcggcgagccagccgagtccgccggccggc
acttcgcggtcccagtcgacgccgctggcgtcggcggcggccggcagcggcttggtggcc
gcgcccagtcccaacttcgcctcggtggcggcagcctcccagccgcccgccgccgcctca
gtacacatcctcaccacgacgacgccgtcgtcgtcgtcgcagcagcaacagcagcaacaa
caacaacagcagcaacaacagcagcagggccagcaagtgaacggggagaagccggccgac
ccgagctcgatgaagtcgctggcacagcacctggagcggacaacgctcaacgcctcgcca
gccgacgtcaataaaacgccgccgacgaacgaggccaccattccggtgctgtacagcgtg
gcgccgctggggcccgtgcccatgaccaaggagcacgactaccagtaccagatgctgcag
gccgccttctaccacatgccacacccatccgactcggagcggctgagggcgtatttgccg
cgaaacccgtaccccacgccgccctactacccccaggtacccccacctggcagtgattcc
atcgatttttttctcaagttgtctgttgaaaccctcttcttcatcttctattatatggaa
ggtacaaaggcccagtatctggcggcgaaggcgctgaagaagcagtcctggaggttccac
accaagtacatgatgtggtttcagcggcacgaggagcccaaggtcatcaccgacgaatat
gagcagggcacgtacgtgtacttcgacttcgaaaagtggagccagcggaagaaggagggc
ttcaagttcgaatacaaatttctggaggaccgggacctgaactga
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